Pairwise Alignments

Query, 593 a.a., succinate dehydrogenase flavoprotein subunit from Magnetospirillum magneticum AMB-1

Subject, 588 a.a., succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  575 bits (1481), Expect = e-168
 Identities = 305/589 (51%), Positives = 392/589 (66%), Gaps = 14/589 (2%)

Query: 11  YDVVVVGAGGAGLRATMGMGQAGFKTACITKVFPTRSHTVAAQGGIGASLGNMAEDNWKW 70
           +D VV+GAGGAG+RA + + + G   A ++KVFPTRSHTV+AQGGI  +LGN  ED+W+ 
Sbjct: 8   FDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNAHEDHWEQ 67

Query: 71  HMYDTVKGSDWLGDQDAIEYMCREAVPAVHELEHFGVPFSRTPEGKIYQRPFGGHMSNFG 130
           HMYDTVKGSD++GDQDAIE+MC+    A+ ELEH G+PFSR   GKIYQRPFGG   NFG
Sbjct: 68  HMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFGGQSKNFG 127

Query: 131 EKPVQRACAAADRTGHAILHTLYSQCLKHQCEFFIEYFAIDLIM-ENGACRGVVAWNLDD 189
            +   R  AAADRTGHA+LH LY Q +KH+ + F E++A+DL+  ++GA  G  A  ++ 
Sbjct: 128 GEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNQDGAIVGCTAIEIET 187

Query: 190 GTLHRFRAHKVVLASGGYGRAFFSCTSAHTCTGDGHGLVARAGLPLQDMEFVQFHPTGIY 249
           G +  F+A   VLA+GG GR + S T+AH  TGDG G+  RAG+ +QDME  QFHPTGI 
Sbjct: 188 GEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQFHPTGIA 247

Query: 250 GSGCLITEGARGEGGYVTNSAGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGV-GKE 308
           G+G L+TEG RGEGGY+ N  GERFMERYAP AKDLASRDVV+R+M  EIREGRG+ G  
Sbjct: 248 GAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREGRGLDGPL 307

Query: 309 HDHIFLHLEHLGAETLELRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNVYGE 368
             H  L L+HLG ETLE RLPG+ E ++ FA +D    PIPVLPT HY MGG+PT V G+
Sbjct: 308 GPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGLPTKVSGQ 367

Query: 369 VLRPTAENPDATVEGLMAIGEAACVSVHGANRLGTNSLLDIVVFGRACALRAAETMKPGT 428
           V+R   +  +  V GL A+GE ACVSVHGANRLG NSLLD+VVFGRA      + +   T
Sbjct: 368 VIRKNTDGTEQDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLGKALDE-T 426

Query: 429 AHKPLPKDGSD----LALSRFDRLRNANGSMHTSEIRLAMQKTMQMDAAVFRTSKSLAEG 484
           A    PKD +D     +L+R  R  +        +IR  +Q  MQ++ +VFR   ++AEG
Sbjct: 427 AD---PKDATDADIQASLARLQRWESNKDGEDPVQIRKDLQLCMQLNFSVFRRGDAMAEG 483

Query: 485 CAKMDQVASTLPQLKINDRSTVWNSDLVEALELENLMDCALATIVSAEARHESRGAHAHE 544
             ++  +   L   K++D S  +N+  +E LEL+NLM  A+AT  +A  R ESRGAH+ E
Sbjct: 484 LEQLKAIRKRLENAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAHSRE 543

Query: 545 DYPDRDDVNWQKHSLAWVENGKVKLDYRPVHTYTLTDEVEYIKPQKRVY 593
           DY +RDD NW  HSL   +     +D R V+      E     P+KR Y
Sbjct: 544 DYLERDDENWLCHSL--FDPVTETMDRRAVNMAPKLREA--FPPKKRTY 588