Pairwise Alignments

Query, 308 a.a., site-specific tyrosine recombinase XerD from Magnetospirillum magneticum AMB-1

Subject, 311 a.a., site-specific tyrosine recombinase XerD from Sinorhizobium meliloti 1021

 Score =  289 bits (740), Expect = 5e-83
 Identities = 158/300 (52%), Positives = 207/300 (69%), Gaps = 9/300 (3%)

Query: 8   HIESFLEMMQVERGASPNTLDAYGRDLADFAEFLDGRGFSPLRADARAVAAYIARQAEIG 67
           ++E+FLEMM  ERGA+ NTL +Y RDL D   FL  RG     A A  + +Y++  A  G
Sbjct: 8   YVEAFLEMMSAERGAAANTLQSYERDLEDARSFLRSRGTGLTDASADDLRSYLSHLAGQG 67

Query: 68  MAARTQARRLSCLKQFYGFVFAERLRPDDPTANIDAPRLGRPLPKYLRREEVTALLDAAR 127
             A +QARRLS L+QFY F++AE LR DDPT  +DAP+  R LPK L  E+VT L+  A 
Sbjct: 68  FKASSQARRLSALRQFYKFLYAEGLRTDDPTGILDAPKKARTLPKTLSIEDVTRLIGQAE 127

Query: 128 A--LEGSDGIL----MTALLETLYAAGLRVSELVSLPLSAVARDPSVLVVRGKGSKERMV 181
           A    GSD ++    M AL+E LYA G+RVSELVSLP S +A++   L++RGKG+KER+V
Sbjct: 128 AEAKSGSDDVMAKLRMHALIELLYATGMRVSELVSLPASVLAQNGRFLIIRGKGNKERLV 187

Query: 182 PLSDPARAALLAWKVERQTLVPKSKPSRWLFPSSGALGHLTRSGFAKMLGRVAVLAGLDP 241
           PLS   +AA+ A +   + L  +S  S WLFPS+G  GHL R  FA+ L  +A  AG+  
Sbjct: 188 PLS---QAAIRAMRAYGEALQEESADSPWLFPSNGKSGHLPRQVFARDLKSLAARAGIRV 244

Query: 242 AKVSPHVLRHSFASHLLAGGADLRSVQEMLGHADIATTEIYTHLIDDEAGRLVRAHHPLA 301
           A +SPHVLRH+FASHLLA GADLR+VQE+LGH+DI+TT+IYTH++++    LV+ HHPLA
Sbjct: 245 AAISPHVLRHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHDLVQNHHPLA 304