Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 567 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  297 bits (760), Expect = 6e-85
 Identities = 173/358 (48%), Positives = 230/358 (64%), Gaps = 3/358 (0%)

Query: 26  MASLIG---KRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRMASSLAVFRDAMV 82
           +A L+G    R I  P+  +   M +L     GV IP     +EIG+MA ++ +F+  ++
Sbjct: 208 LAVLLGWQLTRGIVQPVRLLTGVMGELSAGGRGVAIPETDRGDEIGQMAKAVEIFKAGLI 267

Query: 83  ETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATELHATAQGMQTIAE 142
           E +RL AE   +   R  R  A+++L   F   + G++  ++ +++ L  TA+ M   A 
Sbjct: 268 EADRLAAEEATQRAARESRVTALETLVGGFQDRIGGLVGKLTESSSGLETTARAMSEAAR 327

Query: 143 QTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTAAQQASDEARQTNT 202
            T  +A   + A   AS  V TVA AAEELSASI+EI+ +V QSS   Q+A   A +T+ 
Sbjct: 328 ATDTQAATASDAVGSASMGVRTVAAAAEELSASISEISGKVQQSSEVTQKAMARAAETDK 387

Query: 203 IVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKALANQ 262
           +V  LA  + RIG+VVSLIN IA+QTNLLALNATIEAARAG+AGKGFAVVAGEVK LANQ
Sbjct: 388 MVGRLAEGADRIGEVVSLINAIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKTLANQ 447

Query: 263 TGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAVEEQSAATAEIARN 322
           T +ATEEI  Q+G +Q ATRE + AI  I G I EIN I  ++++AVEEQSAATAEIAR 
Sbjct: 448 TARATEEIGAQIGRIQEATRETIQAIKEISGTIGEINGIVMSVASAVEEQSAATAEIART 507

Query: 323 VDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELKDVVDRFLEGVR 380
           V + S  T +V+ NV GVS TA  TD+AA  VL A+  L+  + EL   +DRF+ GVR
Sbjct: 508 VQRVSTNTDEVTTNVDGVSRTAKATDSAAADVLRASGDLTTVSGELGGEIDRFVGGVR 565



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 16/132 (12%)

Query: 170 EELSASIAEIARQVAQSSTAAQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTN 229
           E   A+ A     + ++ T      ++ R+ + I        TR+ +      +IA   N
Sbjct: 88  EPYRANQAVFRELLQRAKTLTADNPEQQRRFDDIAAQAEIWRTRVAE-----REIALMNN 142

Query: 230 LLALNATIEAARAGEAGKGFAVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIG 289
                 TIEAARA EA     V    ++ L+ +   A E +  Q    +TA  E   A+G
Sbjct: 143 A----ETIEAARALEASGAGKVPMDAIRRLSGEIAGAEEALLKQ----RTAEMEEALALG 194

Query: 290 ---SIVGRIEEI 298
               IVG +  +
Sbjct: 195 RNTMIVGGVVSV 206