Pairwise Alignments

Query, 355 a.a., quinone-dependent dihydroorotate dehydrogenase from Magnetospirillum magneticum AMB-1

Subject, 339 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  261 bits (666), Expect = 2e-74
 Identities = 148/331 (44%), Positives = 204/331 (61%), Gaps = 7/331 (2%)

Query: 3   YFRLAGPLVRLLDAEIAHGLTIGLLK-AGLVPRQPTF--NPEALKVRLWGRDFANPVGLA 59
           ++++A  ++  +D E AH L IG L+  G  P    +  N     V   G  F NPVGLA
Sbjct: 2   FYKIAQKVMFQMDPERAHNLAIGSLRMTGNGPLNAFYAQNITPAPVSFMGLTFPNPVGLA 61

Query: 60  AGFDKNAEVPDAMLAQGFGFVEIGSVTPRPQPGNPKPRMFRLPEDRAVINRMGFNNQGLE 119
           AG DK+ E  DA  A GFG VE+G+VTPRPQPGN  PR+FRL   +A+INRMGFNN+G++
Sbjct: 62  AGMDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDLPRLFRLKPAKAIINRMGFNNKGVD 121

Query: 120 AVAARLAARPRTGIVGANLGKNKDT--EDAAADYEKGAARLAPLSDYLVINVSSPNTPGL 177
            +   L A+    +VG N+GKNKDT  E    DY     ++   + Y+ +N+SSPNTPGL
Sbjct: 122 NLVKNLIAKKTDIMVGVNIGKNKDTPVEQGKDDYLICMDKVYLHAAYIAVNISSPNTPGL 181

Query: 178 RALQGRDQLESLVGRTRAAL--TAAMPSGAPPLLLKIAPDLAWEDLSDIAAVALEGALDG 235
           R+LQ  D L+ L+   +A     A       P+ LKIAPDL  E++ +IA   ++   DG
Sbjct: 182 RSLQYGDLLDELLSAIKAKQLELADKHKKYVPIALKIAPDLTIEEIENIAQALIKNQFDG 241

Query: 236 LIVSNTTVARPESLRSANAGQTGGLSGAPLFESSTAMLRRVYELTRGKLPIIGVGGIASG 295
            I +NTT+ R      ANA ++GGLSG PL E ST +++++    +G++PIIGVGGI S 
Sbjct: 242 AIATNTTLTRDGVSGLANANESGGLSGKPLTELSTKVIKQLATCLQGQIPIIGVGGINSA 301

Query: 296 SEAYAKIRAGASLVQVYSAMVYEGPALITRI 326
            +A AK  AGA++VQ+YS  +Y+GP LI  I
Sbjct: 302 EDALAKFDAGATMVQIYSGFIYQGPKLIKEI 332