Pairwise Alignments

Query, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

Subject, 394 a.a., Acetylornithine deacetylase (EC 3.5.1.16) from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (295), Expect = 3e-31
 Identities = 108/341 (31%), Positives = 153/341 (44%), Gaps = 23/341 (6%)

Query: 55  NLYARLGTEAPN-LCFAGHTDVVP-PGKGWTVEPFAAGIDQGRLFGRGSADMKGAIACFV 112
           NL A +G   P  +  +GHTDVVP  G+ WTV+PF      G+ FGRG+ADMKG +A  +
Sbjct: 59  NLLASIGPAVPGGVVLSGHTDVVPVDGQAWTVDPFCLTEMDGKWFGRGTADMKGYLASVL 118

Query: 113 AAVARLLEDGAPKGSLSLLITGDEEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKL 172
           AAV   L     +  + L  + DEE   + G   +L+ L  R  +   C++GEPT  R +
Sbjct: 119 AAVPVFLSSPL-RRPVHLAFSYDEEVGCL-GVHSLLEVLVRRIAQPALCLIGEPTQLRPV 176

Query: 173 GDMMKIGRRGSLNCRLTVFGTQGHSAYPHLADNPIPRLLDILRRLTE--APLDEGTPHFQ 230
                +G +G L  R  V G   HSAY     N I +   ++ RL E  A L E + H  
Sbjct: 177 -----LGHKGKLAMRCHVRGAACHSAYAPYGVNAIEQAARLIGRLGEIGAQLAEPSRHDP 231

Query: 231 ASTLALTTVDV----GNPATNVIPAEARAGFNIR----FNDLHSGASLERWIRDTVAQAG 282
               A +TV V    G  A N++PA+ R  F +R    F+ L     L+ +   T+  A 
Sbjct: 232 RFDPACSTVQVGVVHGGTALNIVPADCRFDFEVRALPDFDPLVVVEQLQGYAEQTLLPAM 291

Query: 283 GEVEIKVEVSGESFLTPPGALS---DALAEAAFEVTGLRPELSTSGGTSDARFIKNHCPV 339
             V     +  E     PG  +    A A    ++ G     + + GT    F +   P 
Sbjct: 292 QAVAGDTAIRFEPLSAYPGLATSPDSAAARLIAQLCGSDAFGTVAFGTEGGLFHQAGVPT 351

Query: 340 VEFGLVGQTM-HKSDEHVSVADMEALTEIYRRVLVRLAAPS 379
           V  G       HK DE+VSV  M A   +  R+   L  P+
Sbjct: 352 VVCGPGSMDQGHKPDEYVSVEQMAACDRLMDRLASYLCEPN 392