Pairwise Alignments

Query, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

Subject, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (717), Expect = 4e-80
 Identities = 161/371 (43%), Positives = 220/371 (59%), Gaps = 8/371 (2%)

Query: 9   LAQALIRCPSVTPEDAGALDVLAGALEELGFACHHIRSATGGPEIRNLYARLGTEAPNLC 68
           LA+ LI   SVTP DAG  D++   L+ LGF    +       +  N +AR GT++P   
Sbjct: 9   LAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFE----DTTNFWARRGTQSPLFV 64

Query: 69  FAGHTDVVPPG--KGWTVEPFAAGIDQGRLFGRGSADMKGAIACFVAAVARLL-EDGAPK 125
           FAGHTDVVP G    W   PF   +  G L GRG+ADMKG++AC + AV R + E    +
Sbjct: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124

Query: 126 GSLSLLITGDEEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKLGDMMKIGRRGSLN 185
           GS+  LIT DEEGP ++GTV+V++ L AR E ID CIVGEP++   +GD++K GRRGS+ 
Sbjct: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184

Query: 186 CRLTVFGTQGHSAYPHLADNPIPRLLDILRRLTEAPLDEGTPHFQASTLALTTVDVGNPA 245
             L V GTQGH AYPHLA+NP+ + L  L  L     DEG  +F  ++  +  +  G  A
Sbjct: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244

Query: 246 TNVIPAEARAGFNIRFNDLHSGASLERWIRDTVAQAGGEVEIKVEVSGESFLTPPGALSD 305
           +NVIP E    FN RF+   +   ++R +   +   G + ++K  +SG+ FLT  G L  
Sbjct: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304

Query: 306 ALAEAAFEVTGLRPELSTSGGTSDARFI-KNHCPVVEFGLVGQTMHKSDEHVSVADMEAL 364
           A+  A  EV    P L T+GGTSD RFI +    VVE G V  T+HK +E V +AD+E L
Sbjct: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364

Query: 365 TEIYRRVLVRL 375
           T++Y++ L  L
Sbjct: 365 TDMYQKTLNHL 375