Pairwise Alignments

Query, 452 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

Subject, 923 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score =  218 bits (555), Expect = 7e-61
 Identities = 152/452 (33%), Positives = 224/452 (49%), Gaps = 27/452 (5%)

Query: 15  TAAAQAWRESRMDAAEQGFAAAALLE--------PGWSSAHANLGAVLRRLGKCEAAVAS 66
           TAAAQ   +  + A + G   AA+ +        P W++A    G       + E  +  
Sbjct: 4   TAAAQHDYQQAIAAYQAGEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITL 63

Query: 67  YRRALTVGAEDAGTLSNMGNALRDLGLLEESETAHRRAVALAPDNWGYRYNLALLLRDRR 126
            RRA+ +   D    +N+GN L+  G L E+     +A+A+ P +   R+N A+ L+   
Sbjct: 64  LRRAIALDPTDPTHFNNLGNLLQRQGHLTEALERLTQALAIDPTHVAARFNRAITLQKLG 123

Query: 127 LHGEARAMMAELAATDPENAEIQWDLALADLYLGDYRTGFAGYEWRIKLARNPVRDHPG- 185
               A     +L   DP+N EI+++ A A L +GD+  G   YE R +  ++        
Sbjct: 124 DPATALQDYQQLLEADPDNPEIRYNSAHAALAIGDWDFGLPAYEARCQQLQHFPEIEASL 183

Query: 186 --PRWTGDDPTGRTILLLAEQGFGDALQFARYVPLLAAR--GARVVLECLPEQAELFASL 241
             PRW G D   +T+L+  EQGFGD L  AR++PLL  R   AR+V +  P    LF +L
Sbjct: 184 KLPRWQGQDLDQQTLLVWGEQGFGDRLMGARWIPLLRQRYPQARIVWQTSPSLVRLFQTL 243

Query: 242 RDVAALV-AKGAPPPVHDCWAPLASLPHLLGTEFHSIPAEIPYLSAPPRPNLRMVPPPGQ 300
            D   +V A+GA  PV D   PL SL  +  ++ + +P   PY      P+     P   
Sbjct: 244 ADDRLMVLAEGAELPVCDWQVPLLSLMLIFQSDRNRLPWHGPYFF----PHKGDFLPASD 299

Query: 301 KLAVGLVWAGKTTPR-------DRSWPLEQLTPLLGDPRATFYSLQLGPRAGDLKSTGLE 353
           +  +GLVW+    P        ++S PL  L  +L        SLQ+     DL++  L 
Sbjct: 300 RPRLGLVWSAGRNPAQSAEFAANKSCPLALLWSVLSVSGWDVVSLQVDEARQDLQT--LS 357

Query: 354 RLVRDAAPALQSFADTAHVMEHLDLIITIDTSVAHLAGALGRPVWVLLRYVSDWRWQDEP 413
             + D    +  F DT   + HLDL+IT+DT++AHL G +G P WVLL  V DWRW+   
Sbjct: 358 DPLLDLGSEIGDFQDTVDRLAHLDLLITVDTAIAHLGGMIGLPTWVLLPAVPDWRWELSG 417

Query: 414 LTSPWYPTMRLFRQPDPSDFKTPVAEMAAELA 445
            T+PWYP++RLFRQP P D+   +AE+   LA
Sbjct: 418 ATTPWYPSLRLFRQPSPGDWSGAIAELQTALA 449



 Score =  147 bits (370), Expect = 2e-39
 Identities = 134/460 (29%), Positives = 211/460 (45%), Gaps = 37/460 (8%)

Query: 16  AAAQAWRESRMDAAEQGFAAAALLEPGWSSAHANLGAVLRRLGKCEAAVASYRRALTVGA 75
           AA +A+       AE     A  + P   S H  LG  L++ G    A     +AL +  
Sbjct: 472 AADRAFTAQNWPRAEWLIRQAVAIAPEEPSFHRALGRSLKQQGDYAGAA----QALAIAC 527

Query: 76  EDAGTLSNMGNALRDLGLLEESETAH----RRAVALAPDNWGYRYNLALLLRDRRLHGEA 131
           E A T +   +    L   +   TA      +A+AL      +  +  +L        E+
Sbjct: 528 ELAPTQAEFWHERSSLEYYDNQLTAALNSLNQAIALQGATADHLISRGVLHYRLGQFPES 587

Query: 132 RAMMAELAATDPENAEIQWDLALADLYLGDYRTGFAGYEWRIKLARN--PVRDHP-GPRW 188
            A     AA  PE+  ++ +     L+ G++  G+   E R     +  P +     P W
Sbjct: 588 CADYDAAAAIAPESPLLRCNRGFLQLHWGNWLQGWPDLEVRFDFQSDLDPFQYRQLAPAW 647

Query: 189 TGDDPTGRTILLLAEQGFGDALQFARYVPLLAARG--ARVVLECLPEQAELFASLRDVAA 246
            G+    +T+L+  EQG GD L F R++P L  +   A+++    P    L   L D   
Sbjct: 648 QGEPLGQQTLLIWGEQGLGDHLLFCRWLPELRLQHPQAQLIFVTDPLLERLMQQLADDRL 707

Query: 247 LVA-KGAPPPVHDCWAPLASLPHLLGTEFHSIPAEIPYLSAPPRPNLRMVPPP---GQKL 302
            +     P P  D    L SLP +  T     PA +P+  A  + ++    PP    + L
Sbjct: 708 QICCLDEPVPACDRQVALMSLPAIAQTT----PATVPWRGAYFQSSM----PPLRCAETL 759

Query: 303 AVGLVWAG--KTTP------RDRSWPLEQLTP-LLGDPRATFYSLQLGPRAGDLKSTGLE 353
            VG VWA   +++P      R++S PL +L P LL  P   +YS Q+G    +L+   LE
Sbjct: 760 QVGFVWASGKRSSPETARLYREKSCPLNELLPALLAVPAVDYYSFQVGADVAELQPW-LE 818

Query: 354 RLVR--DAAPALQSFADTAHVMEHLDLIITIDTSVAHLAGALGRPVWVLLRYVSDWRWQD 411
           +  R  D +  LQ F DTA  +  +D++I++DT+VA+LAG +  PVW LL   ++WRW  
Sbjct: 819 QSDRLFDLSEQLQDFQDTADWLAEMDVLISVDTAVANLAGMMALPVWTLLPEPANWRWGL 878

Query: 412 EPLTSPWYPTMRLFRQPDPSDFKTPVAEMAAELASLIDER 451
              T+PWYP+MRL+RQ    ++   +A++  +L  L  +R
Sbjct: 879 TGHTTPWYPSMRLYRQTQRGNWSGAIAQIQQDLQQLSRDR 918