Pairwise Alignments

Query, 452 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

Subject, 451 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score =  178 bits (451), Expect = 4e-49
 Identities = 148/448 (33%), Positives = 206/448 (45%), Gaps = 24/448 (5%)

Query: 17  AAQAWRESRMDAAEQGFAAAALLEPGWSSAHANLGAVLRRLGKCEAAVASYRRALTVGAE 76
           A QA  +     A Q    AA  EP         G  L   G+ E A+A+Y+  L     
Sbjct: 7   AEQAASQQDWSTALQLIELAAWQEPDNPQILCRWGDWLAAAGQPEEAIAAYQAVLEFQPG 66

Query: 77  DAGTLSNMGNALRDLGLLEESETAHRRAVALAPDNWGYRYNLALLLRDRRLHGEARAMMA 136
              +++     L + G   E+     +A     D W  R   A+ L+      +A     
Sbjct: 67  CPQSIAAWAAVLNEQGQFAEAIALLDQASEQTADLWHQR---AVALQSLGDWPQALTSCD 123

Query: 137 ELAATDPENAEIQWDLALADLYLGDYRTGFAGYEWRIKLARNPVRDH-PG---PRWTGDD 192
                DP  AE Q+  +   L LGD+  G+  YE R+ L  + +RD  P    P W G+D
Sbjct: 124 SALQLDPTAAESQFLRSKLRLGLGDWSQGWPEYESRL-LVFSELRDRLPSFGCPLWQGED 182

Query: 193 PTGRTILLLAEQGFGDALQFARYVPLLAARGARVVLECLPEQ--AELFASLRDVAALVAK 250
            T +T+L+  EQG+GD +QF RY+ +L  R     L  L  +   +LF  L      VA 
Sbjct: 183 LTNKTLLIWGEQGYGDQIQFVRYLSVLHDRWPETPLLLLVSEPLVDLFRQLAIANLQVAT 242

Query: 251 G---APPPVHDCWAPLASLPHLLGTEFHSIPAEIPYLSAPPRPNLRMVPPPGQKLAVGLV 307
                    +D   PL SLP  LG     IP    YL    +  +R+   P Q L VG V
Sbjct: 243 QFTFETESAYDFHLPLLSLPERLGATADVIPLAQGYLPRSLQSEIRLQANPRQ-LQVGFV 301

Query: 308 W-AGKTTPRDRSW-------PLEQLTPL-LGDPRATFYSLQLGPRAGDLKSTGLERLVRD 358
           W AG+T+ R   W       PLEQ   L L      F+SLQ+GP    L     +    D
Sbjct: 302 WQAGETSDRRYQWRQASKSVPLEQFLQLRLQVNHCQFWSLQVGPARQSLLQNW-DWADCD 360

Query: 359 AAPALQSFADTAHVMEHLDLIITIDTSVAHLAGALGRPVWVLLRYVSDWRWQDEPLTSPW 418
            A  + SFADTA V+  +DL+IT+DT++AHLAGAL  P W+LL   +DWRW      +PW
Sbjct: 361 LADRMHSFADTAAVLNQMDLLITVDTAIAHLAGALEIPTWLLLPKFADWRWSLTGSETPW 420

Query: 419 YPTMRLFRQPDPSDFKTPVAEMAAELAS 446
           Y +MRL+RQ    D+++   ++  +L S
Sbjct: 421 YQSMRLYRQAIAGDWRSVFEQLQQDLNS 448