Pairwise Alignments

Query, 598 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Magnetospirillum magneticum AMB-1

Subject, 559 a.a., Polyhydroxyalkanoic acid synthase from Pseudomonas fluorescens FW300-N2E2

 Score =  355 bits (912), Expect = e-102
 Identities = 191/491 (38%), Positives = 276/491 (56%), Gaps = 7/491 (1%)

Query: 104 PDSGDRRFKDEMWQENEIFDFIKQSYLLSARWMQGVVKNVEGLDDHTAKKVDFYTRQFVD 163
           P   DRRF D  W +N ++    Q+YL   + +   + +   L      +  F      +
Sbjct: 72  PAGDDRRFADPAWSQNPLYKRYLQTYLAWRKELHAWIDD-SNLSPADISRGHFVINLMTE 130

Query: 164 AMAPSNFVLTNPEVLRATVETRGENLLKGLNNLLDDLERGKGNLAIKMTDYDAFKVGENI 223
           AMAP+N    NP  ++   ET G++LL GL++L  DL    G  +    D  AF+VG+++
Sbjct: 131 AMAPTNSA-ANPAAVKRFFETGGKSLLDGLSHLAKDLVHNGGMPS--QVDMGAFEVGKSL 187

Query: 224 AVTPGKVVFQTDLMQLIQYDPTTPQAFEKPLLILPPWINKFYILDLRPKNSLIKWAVDQG 283
            VT G VVF+ D+++LIQY P T Q  E+PLL++PP INKFY+ DL P  SL ++ +   
Sbjct: 188 GVTEGAVVFRNDVLELIQYRPITEQVHERPLLVVPPQINKFYVFDLSPDKSLARFCLRSN 247

Query: 284 HTVFVISWVNPDEKLAHKGFGDYMLEGPLAAIDAIEKATGSRQVNAAGYCLGGTLLACTL 343
              F++SW NP ++    G   Y +E    A+D +   TGS+ VN  G C GG      L
Sbjct: 248 VQTFIVSWRNPTKEQREWGLSTY-IEALKEAVDVVTAITGSKDVNMLGACSGGITCTALL 306

Query: 344 AYLAAKGEDRIASATFFTTMTDFKDPGELGVFIDEEQLSALETRMNQAGFLDGRDMATTF 403
            + AA GE ++ + T   ++ D     ++ +F+DE+ L A +    QAG L+GRDMA  F
Sbjct: 307 GHYAALGEKKVNALTLLVSVLDTTLDTDVALFVDEQTLEAAKRHSYQAGVLEGRDMAKVF 366

Query: 404 NMMRANDLIWSFVVNNYLLGKDPFPFDLLYWNSDSTRMPAAMHSFYLRKMYQENRLVEPG 463
             MR NDLIW++ VNNYLLG +P  FD+L+WN+D+TR+PAA H   L +M++ N L+ P 
Sbjct: 367 AWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNNDTTRLPAAFHG-DLIEMFKNNPLIRPN 425

Query: 464 AIELNGVKIDLGNIKTPLYMLSTREDHIAPWQSTYALTQNVSGPIKFVLSASGHIAGVVN 523
           A+E+ G  IDL  +   ++ L+   DHI PW+S Y   Q   G ++FVLS+SGHI  ++N
Sbjct: 426 ALEVCGTPIDLKQVTADIFSLAGTNDHITPWKSCYKSAQLFGGKVEFVLSSSGHIQSILN 485

Query: 524 PPAANKYCYWTNAKKPKNPEVWLAGATQVEGSWWTDWQKWVEKFAGKQVPARQP-GDGKL 582
           PP   K  Y T+   P   E W   +T+   SWW  WQ W  + +GK   A    G+   
Sbjct: 486 PPGNPKSRYMTSDDMPAKAEDWQENSTKHTDSWWLHWQAWQAERSGKLKKAPTVLGNKAY 545

Query: 583 KAIEAAPGSYV 593
            A EAAPG+YV
Sbjct: 546 PAGEAAPGTYV 556