Pairwise Alignments

Query, 189 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 11/188 (5%)

Query: 5   KVLSEAEMKRVLAVVAQHGILSTRNRLAVLLSHWAGMRAGEIAALKIMDVVNEGGAVRDR 64
           K L   EM ++L V      LS R+R  + L + AG+R  E+ ++ I DV    G +R  
Sbjct: 121 KNLDVDEMAQLLEVTDDDP-LSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIR-- 177

Query: 65  VHLAATQTKGKRGRTVFINTKLQREIARYLEQREWTDE--RKPLIRSQKGGHFSPTTMVM 122
                   KG + R V+   + Q  + ++L+ R    +     L  S+ G   S  ++  
Sbjct: 178 -----VIGKGNKERKVWFAGQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQK 232

Query: 123 LFRRI-YDEAGLSDARSHSGRRSYLTTLANKGVSVFVLQQLAGHQSIQTTQRYVTVNEEM 181
                   +A  S    H  R S+ T +     ++  +Q+L GH++I TTQ Y  ++ + 
Sbjct: 233 RMAEWGQKQAVASHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQH 292

Query: 182 MVKAAELA 189
           + +  + A
Sbjct: 293 LAQVYDQA 300