Pairwise Alignments

Query, 442 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 800 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  121 bits (303), Expect = 9e-32
 Identities = 92/274 (33%), Positives = 142/274 (51%), Gaps = 31/274 (11%)

Query: 47  NRSRSLLIQSVGMSIHLNGTVTQAVHTLRSIREMSRRMATISASTEELVSTVQAIARTSE 106
           +R R++   + G    ++G V     +  ++   ++ M++ +A T    S   A+A  SE
Sbjct: 518 DRRRTMNEFANGFEQAVSGVVLSLTESAGNLGRDAQEMSSDAALTTAKSS---AVAAASE 574

Query: 107 LAAANARSV----QDVSDEGARSTEAVVSTMQNIVTTVNDAAER---VSRLTEASSSIGA 159
            A++N ++V    +++S   A  +  + S+ Q  V     A E    V  L EA+  IG 
Sbjct: 575 QASSNVQTVAAAAEELSSSIAEISRQLNSSSQVAVGAAAKATETNGIVEGLAEAAQRIGQ 634

Query: 160 SVKQIEQIARQTNILALNATIEAARAGEFGKGFAVVATEVKNLANQVGQATQEIRSRIDM 219
            V  I +IA QTN+LALNATIEAARAGE GKGFAVVATEVKNLA Q  +AT+EI S++  
Sbjct: 635 VVDLIGEIAEQTNLLALNATIEAARAGEAGKGFAVVATEVKNLAGQTAKATEEISSQVAQ 694

Query: 220 LTQETAAILTGMGKGAETVREGEQVVLGSVDKMRTVSHEIRDVTTLMQEISEHLAQQRHA 279
           +   T                      G+V  +RT+S  +  +++ + EI+  + QQ  A
Sbjct: 695 MQAATG---------------------GAVGAIRTISDAVGTISSTVTEIARAMEQQGLA 733

Query: 280 AQEIADNLEAAAARSVDDTKAINTVIDISSKASG 313
            +EIA N+  AA  + +    I  V + ++K  G
Sbjct: 734 TREIAQNVNQAAEGTQEVMHHIAEVTNAATKTGG 767



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 19/157 (12%)

Query: 10  TEFEALVDRLIDGGYR--SLPEASGPLADKLKTLAEKLENRSRSLLIQSVGMSIHLNGTV 67
           TE   +V+ L +   R   + +  G +A++   LA      +        G ++      
Sbjct: 616 TETNGIVEGLAEAAQRIGQVVDLIGEIAEQTNLLALNATIEAARAGEAGKGFAVVATEVK 675

Query: 68  TQAVHTLRSIREMSRRMATISASTEELV--------------STVQAIARTSELAAANAR 113
             A  T ++  E+S ++A + A+T   V              STV  IAR  E      R
Sbjct: 676 NLAGQTAKATEEISSQVAQMQAATGGAVGAIRTISDAVGTISSTVTEIARAMEQQGLATR 735

Query: 114 SVQDVSDEGARSTEAV---VSTMQNIVTTVNDAAERV 147
            +    ++ A  T+ V   ++ + N  T    AA+ V
Sbjct: 736 EIAQNVNQAAEGTQEVMHHIAEVTNAATKTGGAADAV 772



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 63  LNGTVTQAVHTLR----SIREMSRRMATISASTEELVSTVQAIARTSELAAANARSVQDV 118
           ++ TVT+    +     + RE+++ +   +  T+E++  +  +   +      A +V   
Sbjct: 716 ISSTVTEIARAMEQQGLATREIAQNVNQAAEGTQEVMHHIAEVTNAATKTGGAADAVLSA 775

Query: 119 SDEGARSTEAVVSTMQNIVTTVNDA 143
           S   AR  E + S +Q  +  V  A
Sbjct: 776 SRTLARQAEHLRSEVQGFLNKVRTA 800