Pairwise Alignments

Query, 288 a.a., DNA-directed RNA polymerase specialized sigma subunit from Magnetospirillum magneticum AMB-1

Subject, 182 a.a., RNA polymerase sigma-70 factor (ECF subfamily) from Paraburkholderia graminis OAS925

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 17  PRLRLLAYRLLGSTADAEDVLQDAWLKWSRGSDGVE---EPAAFLTTQVTRLALDRLRKD 73
           PRL   + RL G+  DAED+LQ A ++    +  ++    P +++ + V    L+ LR  
Sbjct: 18  PRLWAFSLRLCGNQHDAEDLLQRACVRGLERAHQLQPGTSPLSWMFSIVHSTWLNELRAR 77

Query: 74  QRRARLGAQWLPDPWVEPL-EPGE---ADLSTGLLLLLERLTPDQRAVYVLREAMDLDFA 129
             R+R   +W  D ++E + +PG    AD  + ++  +ERL   QR V +L       +A
Sbjct: 78  NVRSRSSMEW-DDNFLETVPDPGARNPADSVSEIIAAVERLPDAQRTVMLLVAVEGFSYA 136

Query: 130 DIAAILGKSVATCRQIMSRARAAL 153
           + A +LG  + T    +SRAR  +
Sbjct: 137 EAAEVLGVPIGTIMSRLSRARQTI 160