Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (276), Expect = 4e-29
 Identities = 96/314 (30%), Positives = 147/314 (46%), Gaps = 27/314 (8%)

Query: 42  YRRSVREQRRLVRVSDRLQAQLATVNQELGKRKAEAEDALEDLKAAQESLVQAEKLASLG 101
           Y+R    +R+   ++++L   L   ++ L  +  E +  LE L  AQ  L+Q+EK+AS+G
Sbjct: 7   YQRIYERERKARILAEKL---LEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVG 63

Query: 102 ALVGGVAHEINTPVGIALSCASHLADSTGAMRKLFEADDISVEDFE---------RFMDT 152
            L  GVAHEIN P+G  LS  + L D      +L +  + S   FE         RF   
Sbjct: 64  QLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQ 123

Query: 153 -----VKDTTGLILTNVERAAELIRSFKQVAVDRTS---SERRRFDLATYIRETLFSLGP 204
                V++    +L+ VE +A  +   K +     S   S   RF           +L  
Sbjct: 124 HDLAFVRED---VLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRI 180

Query: 205 HLRQAGHTVRLDCPEGIVMDSYPGA---LSQVLGNFVMNSLVHGYEPGELGTLSMTVERE 261
              Q  +T+ +D      +    G    + QVL N  +N+     E GEL   + T+  +
Sbjct: 181 VWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEK 240

Query: 262 GADQVRLTYADDGKGIPEDNLGRIFDPFFTTRRGSGGSGLGLHIVYNLVTGPLGGSVAAE 321
           G   V++  AD+G GI  ++L +IFDPFFTT+    G+GLGL I + +V     G ++  
Sbjct: 241 GKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVE-KHQGKISVT 299

Query: 322 SPPGGGTRFTVQLP 335
           S  G GTRFT+  P
Sbjct: 300 SEVGQGTRFTLLFP 313