Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 1186 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.2 bits (243), Expect = 1e-24
 Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 26/298 (8%)

Query: 61   AQLATVNQELGKRKAEAED--ALEDLKAAQESLVQAEKLASLGALVGGVAHEINTPV--- 115
            A  A+  +E GKR+       +++ LK AQ   +QA +LAS+G L  G+AHEINTP+   
Sbjct: 889  AYAASPLEEGGKRRIAVLSFRSIDALKEAQREALQASRLASVGQLAAGIAHEINTPIQYI 948

Query: 116  --------GIALSCASHLADSTG-AMRKLFEADD---ISVEDFERFMDTVKDTTGLILTN 163
                    G        LAD    A R   EA+     + +D    M+ +       L  
Sbjct: 949  GDNLRFIEGALGELGGVLADLRALAARGGLEAEADGCFAAKDIAYLMEELPLAATQSLQG 1008

Query: 164  VERAAELIRSFKQVAVDRTSSERRRFDLATYIRETLFSLGPHLRQAGHTVRLDCPEGI-V 222
            V+  A ++RS K+ +   T+++    D+   I  TL       +Q    V  D  + + +
Sbjct: 1009 VDHVAHIVRSMKEFSHPGTTAKVAT-DINRAIDSTLTVSRNEWKQLAQ-VETDLDDDLPL 1066

Query: 223  MDSYPGALSQVLGNFVMNSLVHGYEP----GELGTLSMTVEREGADQVRLTYADDGKGIP 278
            +  +   ++QVL N ++N+  H  E     G+LGT+ +    E A+ + +   D G G+P
Sbjct: 1067 ILCFAAEINQVLLNLIVNA-AHAIETVRAEGQLGTIRIATRGE-AECIEIRITDSGPGVP 1124

Query: 279  EDNLGRIFDPFFTTRRGSGGSGLGLHIVYNLVTGPLGGSVAAESPPGGGTRFTVQLPL 336
                 +IFDPFFTT+    G+G GL I  ++V    GG +  ++    G  F V+LP+
Sbjct: 1125 PAIRDKIFDPFFTTKSVGKGTGQGLSICRDVVVTKHGGKMYLDTSVAPGACFVVRLPI 1182