Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  104 bits (260), Expect = 9e-27
 Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 26/288 (9%)

Query: 68  QELGKRKAEAEDALEDLKAAQESLVQAEKLASLGALVGGVAHEINTPVG----------- 116
           QEL +  AEA+   + L  AQ  L+Q+EK+AS+G L  GVAHE+N P+G           
Sbjct: 716 QELQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDH 775

Query: 117 -----IALSCASHLADSTGA--MRKLFEADDISVE-DFERFMDTVKDTTGLILTNVERAA 168
                 A+  A   ADS      R+L  A  + +E DF+     +          +ER A
Sbjct: 776 YLREIFAIIAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVA 835

Query: 169 ELIRSFKQVAVDRTSSERRRFDLATYIRETLFSLGPHLRQAGHTVRLDCPEGIVMDSYPG 228
           ++ R  K  +     +E +  DL   +  TL  +   L+    TV  +  E  ++   P 
Sbjct: 836 KIARDLKDFS-RAGEAESQWADLHQGLDSTLNIVWNELKYK-CTVHKEYGELPLVWCEPS 893

Query: 229 ALSQVLGNFVMNSLVHGYEPGELGTLSMTVEREGADQVRLTYADDGKGIPEDNLGRIFDP 288
            ++QV  N ++N+        + G + +   R G D+V +  +D G GI  + L R+F+P
Sbjct: 894 QINQVFMNLLVNA---AQAIPKKGDIWLRTGRRG-DEVFVAVSDSGCGIAPEYLHRLFEP 949

Query: 289 FFTTRRGSGGSGLGLHIVYNLVTGPLGGSVAAESPPGGGTRFTVQLPL 336
           FFTT+    G+GLGL + Y++V     G +  ES PG G+ FTV LP+
Sbjct: 950 FFTTKPVGKGTGLGLSLAYSIVQ-KHQGRLEVESEPGRGSTFTVWLPI 996