Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  122 bits (305), Expect = 4e-32
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 35/359 (9%)

Query: 6   LFDAEEKSLEQAEDL-----RRQLEQAPAPVRDGISSLVEAYRRSVREQRRLVRVSDRLQ 60
           L DA+ + +   E L     R++ E+A       +  LVE  RR+ +       + + ++
Sbjct: 378 LKDAQGRIIGAIETLVDVTERKEAEEALRNAHTKLEILVE--RRTAQLSLAKQALEEDVR 435

Query: 61  AQLATVNQELGKRKAEAEDALEDLKAAQESLVQAEKLASLGALVGGVAHEINTPVGIALS 120
            + A+ N EL +R AE  +  + L+ AQE LVQ+EK+AS+G L  GVAHEIN P+G   S
Sbjct: 436 RREASEN-ELRQRNAELLEVNKRLQEAQEQLVQSEKMASIGQLAAGVAHEINNPIGYVQS 494

Query: 121 CASHLADSTGAMRKLFEADDISVE-------------------DFERFMDTVKDTTGLIL 161
             S L      M+ + ++   +V                    DF+  ++ +        
Sbjct: 495 NLSTLGRYLEDMQTVLDSLATAVAQLPSEHPAAQAVARVKQDLDFDFLLEDLPSLVTQSR 554

Query: 162 TNVERAAELIRSFKQVAVDRTSSERRRFDLATYIRETLFSLGPHLRQAGHTVRL--DCPE 219
             ++R  +++   K  +    S + +  DL   +  TL  +   ++     VR     PE
Sbjct: 555 DGIDRVRKIVADLKDFSRLDASQDWQWADLHQGLDSTLNIVNNEIKYRAEVVREYGQLPE 614

Query: 220 GIVMDSYPGALSQVLGNFVMNSLVHGYEPGELGTLSM-TVEREGADQVRLTYADDGKGIP 278
              ++  P  L+QV  N ++NS  H    G++G +++ +   E A QV L   D+G GI 
Sbjct: 615 ---VECLPSQLNQVFLNLLVNS-AHAMPEGQMGRITLRSGHDEPAHQVWLEVEDNGSGIS 670

Query: 279 EDNLGRIFDPFFTTRRGSGGSGLGLHIVYNLVTGPLGGSVAAESPPGGGTRFTVQLPLS 337
            +N+ R+FDPFFTT+    G+GLGL + Y +V     G +   S  G GT F + LP+S
Sbjct: 671 PENMHRLFDPFFTTKPVGKGTGLGLSLSYGIVQ-KHHGQITVSSELGKGTTFRIVLPVS 728