Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.2 bits (243), Expect = 6e-25
 Identities = 90/311 (28%), Positives = 146/311 (46%), Gaps = 36/311 (11%)

Query: 35  ISSLVEAYRRSV----REQRRLVRVSDRLQAQLATVNQELGKRKAEAEDALEDLKAAQES 90
           +S+L E + R +    R   ++   +++L+ ++    + L  +  E +  +  L   ++ 
Sbjct: 399 LSNLAEQFDRMLDLLQRRNAQIQAAAEQLEMKVEERTRSLQDKTLELQRNVALLNETRQQ 458

Query: 91  LVQAEKLASLGALVGGVAHEINTPVGIALSCASHLADSTGAMRKL-FEADDISVEDFERF 149
           LV  EKL +LG L  G+AHEIN P  + L          G M  L +E  D +       
Sbjct: 459 LVTNEKLTALGELTAGIAHEINNPTAVIL----------GNMELLRYELGDKA------- 501

Query: 150 MDTVKDTTGLILTNVERAAELIRSFKQVAVDRTSSERRRFDLATYIRETLFSLGPHLRQA 209
            + VK+   L++  V R + +IRS  Q +     +        T I E +  L  H  Q 
Sbjct: 502 -EVVKEEIDLVIQQVGRISTIIRSLLQYSRPGEFNAPLEMHPITPIIEEMLVLVRHSIQK 560

Query: 210 GHTVRL-----DCPEGIVMDSYPGALSQVLGNFVMNSLVHGYEPGELGTLSMT-VEREGA 263
              V +      CP   V  + P  L QVL N V+N+       G +   +   V+++ A
Sbjct: 561 QEVVLITELNASCP---VQVNRPQLL-QVLINLVVNAAHAMDGKGRIWVRTYDWVQQDIA 616

Query: 264 DQVRLTYADDGKGIPEDNLGRIFDPFFTTRRGSGGSGLGLHIVYNLVTGPLGGSVAAESP 323
             V++   D+G GI  + LGRIFDPF+TTR+   G+GLGL + Y ++   +GG++   S 
Sbjct: 617 IGVKIEVEDEGSGIEPEQLGRIFDPFYTTRK--DGTGLGLSLSYGIIK-RIGGTIEVSSV 673

Query: 324 PGGGTRFTVQL 334
            G G+ FT+ L
Sbjct: 674 LGKGSIFTIGL 684