Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 85/275 (30%), Positives = 128/275 (46%), Gaps = 27/275 (9%)

Query: 84  LKAAQESLVQAEKLASLGALVGGVAHEINTPVGIALSCASHLADSTGAMRKL-------- 135
           L+AAQ  L+Q+EK+ ++G L  GVAHEIN P+G   S    L D    + KL        
Sbjct: 158 LEAAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNLQSLQDYNNKLLKLLNFYQKLT 217

Query: 136 ----------FEADDISVEDFERFMDTVKDTTGLILTNVERAAELIRSFKQVA-VDRTSS 184
                      E D +    FE     + D     +  ++R A +++S K  + VD  SS
Sbjct: 218 HKIGSVPYFTLEQDMLKRYQFEFICSDLPDLIRESIEGLDRVAVIVKSLKSFSHVD--SS 275

Query: 185 ERRRFDLATYIRETLFSLGPHLRQAGHTVRLDCPEGIVMDSYPGALSQVLGNFVMNSLVH 244
           E +  ++   I  TL      ++     +R        +   P  L+QV  N ++N+   
Sbjct: 276 EWQYANVIEGIENTLKIAANQIKYKAVVLRNFQDNLPELYCQPMQLNQVFLNLLVNAAQA 335

Query: 245 GYEPGELGTLSMTVEREGADQVRLTYADDGKGIPEDNLGRIFDPFFTTRRGSGGSGLGLH 304
             E GE   +S+ V    A+ + +   D G GI   +L +IF+PF+TT+    G+GLGL 
Sbjct: 336 IEERGE---ISIDVSASDAEFI-IVIRDTGSGIAASDLRKIFEPFYTTKLVGTGTGLGLS 391

Query: 305 IVYNLVTGPLGGSVAAESPPGGGTRFTVQLP-LSP 338
           + Y++V     G +   S  G GT FTV LP LSP
Sbjct: 392 LSYSIVQ-KHKGEIKVSSVLGEGTAFTVILPILSP 425