Pairwise Alignments

Query, 567 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 478 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 97/384 (25%), Positives = 159/384 (41%), Gaps = 40/384 (10%)

Query: 88  ARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTT------ 141
           A +LY  L  +  RG++L     N +    ++   ER  +   +  +  R+S        
Sbjct: 86  AERLYFRLREQVGRGKAL-----NTVKIPTVQVAAERFMISLNRDLLNGRISQDRHKHHR 140

Query: 142 --LERYFVPF--FDDKLIDTITAADLVRYHEWRESYAIAYKGKTF--IKYERNGKELVRP 195
             L R+ +P+  F    +D +T   L R+  WR +Y     GK    I Y R    L+R 
Sbjct: 141 VFLNRFVIPYEPFFKLTVDEVTEDHLTRWQHWRTTYWFEGPGKEVHEIPYYRGDTRLIRK 200

Query: 196 FTPVTPSPATIR---KERQQFYQFMEFSASRGYLRAEAIPRFK----RLSGTGSVRLAFS 248
             P    P T+    +++ QF     F  ++G+++   IPR+     R+S     R AF+
Sbjct: 201 IRPEERKPPTLATKARDQSQFNSLFNFCVAQGWIKKSQIPRYSIQNTRVS-PPKKRPAFT 259

Query: 249 PDEIERLQKV--SASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISG 306
            ++ +RL K           L    RR+  I  +   ++   GLR  E   L F  L   
Sbjct: 260 REQWDRLDKFVHDGWLDPPKLFGDSRRSRQILWWFCTIVRAYGLRVSEGYSLTFGSLRPT 319

Query: 307 VDKAGEISYLVRLRPEHLKKADVRKHLRTVTPQSGF----KSIVDNLKKAYAHFDKYEVT 362
           V   GE + ++ + P  +K A    H R V P   F      I + L   Y     +   
Sbjct: 320 VLDNGERTLMLHVPP--IKFAG---HERVVEPIFRFIPEVLRIAETLPGFYEKHYGFRPE 374

Query: 363 EDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKSHYALGSFRHTFITDRLYERQDL 422
             + ++ +++ T        F  LL  A   +  +  + Y+LGS RH+ IT+ + E   L
Sbjct: 375 PHESLWLNRNRTAITTFYVGFESLLKKAGVEKDAQ-GNLYSLGSLRHSAITEEI-ETTTL 432

Query: 423 G--FVSRWTGTSIEMIDRHYSHVL 444
               ++ W GTS++MI  HY   L
Sbjct: 433 NPHIIADWAGTSMKMIQNHYGQPL 456