Pairwise Alignments

Query, 465 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 561 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  135 bits (339), Expect = 5e-36
 Identities = 107/284 (37%), Positives = 145/284 (51%), Gaps = 42/284 (14%)

Query: 60  IKALADRLESQAQANLRLDVGLSVNVNEAVTKAAGMMRDVGEVDRRAQAIAVAAEQLVSS 119
           +  LA+R E      ++    +S        +A  M R  G+ DR A A+A A EQ  ++
Sbjct: 284 LAGLAERFERSVGEVMK---SVSHETEAMEREAQEMTRAAGQTDRLAGAVASATEQTSAN 340

Query: 120 VAEIARTSKAAAEDAGAAESVAQESHGAADQAIGAMQAIAEAVQAAAGKVDSLAEASVQI 179
           V  +A     A E      SV + S   AD +  A  A A A + A GKV  LAEA  +I
Sbjct: 341 VQTVA----VATEQLSG--SVGEISRRVADASRIARDA-ATASERATGKVTGLAEAVGRI 393

Query: 180 GDIVNQIEDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTARATVDIRARI 239
           G +V+ I DIA+QTNLLALNATIEAARAGEAGKGFAVVA EVK+LA+QTARAT +I A++
Sbjct: 394 GTVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATEEIAAQV 453

Query: 240 ESLRVEMGEIVRTMQDGAGAVEHGKEVISATSDGMGRLSTQVQGVSVKMAQIAGILNQQS 299
             ++   GE V                  A   G+ R+  QV G++     IA  + +Q 
Sbjct: 454 AGVQSATGEAV------------------AEIGGVARVIEQVNGIA---TIIASAVEEQG 492

Query: 300 AASAEVAEGVGAIAGLSARNVATINDVVEEMDGASKGIVAALNE 343
           AA+  +           +RNV    DV  ++     G+ AA  +
Sbjct: 493 AATQAI-----------SRNVQQAADVTRDVARDISGVTAAAGQ 525



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 18/175 (10%)

Query: 71  AQANLRLDVGLSVNVNEAVTKAAGMMRDVGEVDRRAQAIAVAAEQLVSSVAEIARTSKAA 130
           AQ NL L +  ++    A     G     GEV   A   A A E++ + VA +   +  A
Sbjct: 405 AQTNL-LALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATEEIAAQVAGVQSATGEA 463

Query: 131 AEDAGAAESVAQESHGAADQAIGAMQAIAEAVQAAAGKVDSLAEASVQIGDIVNQIEDIA 190
             + G    V ++ +G A     A++    A QA +  V   A+ +  +        DI+
Sbjct: 464 VAEIGGVARVIEQVNGIATIIASAVEEQGAATQAISRNVQQAADVTRDVA------RDIS 517

Query: 191 SQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTARATVDIRARIESLRVE 245
             T           A AG+ GK    V    + LA Q+     +I   +++LR +
Sbjct: 518 GVT-----------AAAGQCGKMAYAVLEASRQLAQQSETLNGEIGGFLKTLRTQ 561



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 28/258 (10%)

Query: 107 QAIAVAAEQLVSSVAEIARTSKAAAEDAGAAESVA--------QESHGAADQAIGAMQAI 158
           ++++V    L      +A       ++ GA  S A        ++    ADQA    ++ 
Sbjct: 218 RSLSVRMHALADGDLSVAFPEATRRDEIGAMASAARVFLSNAEEKKRLKADQAATLRRSE 277

Query: 159 AEAVQAAAGKVDSLAEASVQIGDIVNQIEDIASQTNLLALNATIEAARAGEAGKGFAVVA 218
            +  +  AG  +    +   +G+++   + ++ +T  +   A      AG+  +    +A
Sbjct: 278 EDKRRTLAGLAERFERS---VGEVM---KSVSHETEAMEREAQEMTRAAGQTDR----LA 327

Query: 219 NEVKNLANQTARATVDIRARIESLRVEMGEIVRTM-------QDGAGAVEHGKEVISATS 271
             V +   QT+     +    E L   +GEI R +       +D A A E     ++  +
Sbjct: 328 GAVASATEQTSANVQTVAVATEQLSGSVGEISRRVADASRIARDAATASERATGKVTGLA 387

Query: 272 DGMGRLSTQVQGVSVKMAQ---IAGILNQQSAASAEVAEGVGAIAGLSARNVATINDVVE 328
           + +GR+ T V  ++   AQ   +A     ++A + E  +G   +AG      +      E
Sbjct: 388 EAVGRIGTVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLASQTARATE 447

Query: 329 EMDGASKGIVAALNEMAA 346
           E+     G+ +A  E  A
Sbjct: 448 EIAAQVAGVQSATGEAVA 465