Pairwise Alignments

Query, 465 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 669 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  132 bits (332), Expect = 4e-35
 Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 44/288 (15%)

Query: 56  VTAKIKALADRLESQAQANLRLDVGLSVNVNEAVTKAAGMMRDVGEVDRRAQAIAVAAEQ 115
           V +++ + A +L S AQ       G+S    +   +A+ +     +     + +A AAE+
Sbjct: 406 VLSRVSSAATQLNSTAQ-------GMSATAEQTTRQASAVAAASTQATANVETVAAAAEE 458

Query: 116 LVSSVAEIARTSKAAAEDAGAAESVAQESHGAADQAIGAMQAIAEAVQAAAGKVDSLAEA 175
           L SS+ EI+R    +   AG A S A+ +                        V  L +A
Sbjct: 459 LTSSIQEISRQVAQSNSIAGQAVSTAERTDAT---------------------VRGLVDA 497

Query: 176 SVQIGDIVNQIEDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTARATVDI 235
           + +IG++V  I DIASQTNLLALNATIEAARAGEAGKGFAVVA+EVK+LANQTA+AT DI
Sbjct: 498 AQRIGEVVQLINDIASQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATEDI 557

Query: 236 RARIESLRVEMGEIVRTMQDGAGAVEHGKEVISATSDGMGRLSTQVQGVSVKMAQIAGIL 295
             +I  ++       +  ++ AGA+     VI   S     ++  V+       +I+  +
Sbjct: 558 SGQIAGIQ-------QVSREAAGAIAEIGRVIGEISHISTTIAAAVEEQGAATQEISRNV 610

Query: 296 NQQSAASAEVAEGVGAIAGLSARNVAT------INDVVEEMDGASKGI 337
            Q +  + EV+   G IAG++    AT      + D  + + G ++G+
Sbjct: 611 QQAARGTQEVS---GNIAGVTQAAEATGDASRQVLDAADGLSGEAEGL 655



 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 23/209 (11%)

Query: 4   IFGGKTAAKADLRPMDVANDQALSSLQSESIGAALDQLLAGKYHSVPAGTCPVTAKIKAL 63
           +    T A A++  +  A ++  SS+Q  S   A    +AG+  S    T      +   
Sbjct: 438 VAAASTQATANVETVAAAAEELTSSIQEISRQVAQSNSIAGQAVSTAERTDATVRGLVDA 497

Query: 64  ADRL--------ESQAQANLRLDVGLSVNVNEAVTKAAGMMRDVGEVDRRAQAIAVAAEQ 115
           A R+        +  +Q NL L +  ++    A     G      EV   A   A A E 
Sbjct: 498 AQRIGEVVQLINDIASQTNL-LALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATED 556

Query: 116 LVSSVAEIARTSKAAA-------------EDAGAAESVAQESHGAADQAIGA-MQAIAEA 161
           +   +A I + S+ AA                    + A E  GAA Q I   +Q  A  
Sbjct: 557 ISGQIAGIQQVSREAAGAIAEIGRVIGEISHISTTIAAAVEEQGAATQEISRNVQQAARG 616

Query: 162 VQAAAGKVDSLAEASVQIGDIVNQIEDIA 190
            Q  +G +  + +A+   GD   Q+ D A
Sbjct: 617 TQEVSGNIAGVTQAAEATGDASRQVLDAA 645



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 15/66 (22%), Positives = 31/66 (46%)

Query: 265 EVISATSDGMGRLSTQVQGVSVKMAQIAGILNQQSAASAEVAEGVGAIAGLSARNVATIN 324
           EV+S  S    +L++  QG+S    Q     +  +AAS +    V  +A  +    ++I 
Sbjct: 405 EVLSRVSSAATQLNSTAQGMSATAEQTTRQASAVAAASTQATANVETVAAAAEELTSSIQ 464

Query: 325 DVVEEM 330
           ++  ++
Sbjct: 465 EISRQV 470