Pairwise Alignments

Query, 465 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 1406 a.a., methyl-accepting chemotaxis sensory transducer with phytochrome sensor from Synechococcus elongatus PCC 7942

 Score =  132 bits (333), Expect = 6e-35
 Identities = 112/360 (31%), Positives = 175/360 (48%), Gaps = 32/360 (8%)

Query: 7    GKTAAKAD-LRPMDVANDQALSSLQ-----SESIGAALDQLLAGKYHSVPAGTCPVTAKI 60
            G   A+AD L+  + A D+A    Q     +E+I A L QLL+        G   V A I
Sbjct: 1043 GLALARADFLQQAETARDRAEQLAQEQQQRTEAIQAELIQLLSD-VEDASRGDLTVRADI 1101

Query: 61   KA-----LADRLESQAQANLRLDVGLSVN---VNEAVTKAAGMMRDVGEVDRRAQAIAV- 111
             A     +AD   S  ++   + V +  +   VN ++   A  M+ +   D ++QA  + 
Sbjct: 1102 SAGEISTVADIFNSLIESLRAVVVQVKASTQKVNTSLDSDANSMQRLA-ADSQSQAEKIK 1160

Query: 112  ----AAEQLVSSVAEIARTSKAAAEDAGAAESVAQESHGAADQAIGAMQAIAEAVQAAAG 167
                A  ++  S+ +++ T+  AAE A  +   A  S    D+ + ++  + E V   A 
Sbjct: 1161 KTLNAVAEMSKSILDVSNTANQAAEVARKSSQTAISSGQTMDETVRSILHLRETVAETAK 1220

Query: 168  KVDSLAEASVQIGDIVNQIEDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQ 227
            KV  L E+S QI  +++ I  IA QTNLLA+NA+IEAARAGE G+GFAVVA EV  LA +
Sbjct: 1221 KVKRLGESSQQISKVISLINQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGQLATR 1280

Query: 228  TARATVDIRARIESLRVEMGEIVRTMQDGAGAVEHGKEVISATSDGMGRLSTQVQGVSVK 287
            +A AT +I   +E+++ E  E+V  M+ G   V  G +++ AT   +  +    Q +   
Sbjct: 1281 SANATKEIEQIVETIQQETNEVVTAMETGTSQVVEGTQLVEATKKSLEEIVQVSQQIDQL 1340

Query: 288  MAQIAGILNQQSAASAEVAEGVGAIAGLSARNVATINDVVEEMDGASKGIVAALNEMAAL 347
            +  I+     QS  S  V   +  +AG S           EE+   S+ I A+L    A+
Sbjct: 1341 VQAISQATVSQSQTSNVVTNLMEEMAGFS-----------EEISDTSRHISASLQATVAV 1389



 Score = 33.1 bits (74), Expect = 6e-05
 Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 9/215 (4%)

Query: 27   SSLQSESIGAALDQLLAGKYHSVPAGTCPVTAKIKALADRLESQAQANLRLDVGLSVNVN 86
            SS  + S G  +D+ +    H +         K+K L +  + Q    + L   +++  N
Sbjct: 1190 SSQTAISSGQTMDETVRSILH-LRETVAETAKKVKRLGESSQ-QISKVISLINQIALQTN 1247

Query: 87   EAVTKAAGMMRDVGEVDRRAQAIAVAAEQLVSSVAEIARTSKAAAEDAGAAESVAQESHG 146
                 A+      GE  R    +A    QL +      R++ A  E     E++ QE++ 
Sbjct: 1248 LLAINASIEAARAGEEGRGFAVVAEEVGQLAT------RSANATKEIEQIVETIQQETNE 1301

Query: 147  AADQAIGAMQAIAEAVQAAAGKVDSLAEASVQIGDIVNQIEDIASQTNLLALNATIEAAR 206
                       + E  Q       SL E  VQ+   ++Q+    SQ  +     +     
Sbjct: 1302 VVTAMETGTSQVVEGTQLVEATKKSLEEI-VQVSQQIDQLVQAISQATVSQSQTSNVVTN 1360

Query: 207  AGEAGKGFAVVANEVKNLANQTARATVDIRARIES 241
              E   GF+   ++     + + +ATV +  +++S
Sbjct: 1361 LMEEMAGFSEEISDTSRHISASLQATVAVAQKLKS 1395