Pairwise Alignments

Query, 227 a.a., 30S ribosomal protein S3 from Magnetospirillum magneticum AMB-1

Subject, 229 a.a., 30S ribosomal protein S3 (RefSeq) from Shewanella loihica PV-4

 Score =  295 bits (756), Expect = 4e-85
 Identities = 148/224 (66%), Positives = 176/224 (78%), Gaps = 7/224 (3%)

Query: 1   MGQKVNPIGLRVGINRTWDSRWFADET-YAKLLHQDLKLRKYLREKLAQAGVSRVVIERP 59
           MGQKV+P G+R+GI + W S W+AD++ YA  L  D ++RK+L +KL QA VS++VIERP
Sbjct: 1   MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60

Query: 60  AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGSEVHLNIVEIRKPELDAQLVAESI 119
           AK  R+TIHTARPGVVIGKKG D+E LR E++K+TG    +NI EIRKPELDA+LVAE I
Sbjct: 61  AKSVRVTIHTARPGVVIGKKGEDVEKLRNEVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120

Query: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
           A QLERRV FRRAMKRAVQ+AMRLGA+GI++  SGRLGGAEIAR EWYREGRVPLHTLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180

Query: 180 DVDYGVGTAHTTYGSCGVKVWVFKGEIL------AHDPMAQDKR 217
           D+DY    +HT YG  GVKVWVFKGE+L        +P  Q KR
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPALEEPKQQPKR 224