Pairwise Alignments

Query, 227 a.a., 30S ribosomal protein S3 from Magnetospirillum magneticum AMB-1

Subject, 230 a.a., ribosomal protein S3 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  296 bits (758), Expect = 2e-85
 Identities = 143/208 (68%), Positives = 173/208 (83%), Gaps = 1/208 (0%)

Query: 1   MGQKVNPIGLRVGINRTWDSRWFADET-YAKLLHQDLKLRKYLREKLAQAGVSRVVIERP 59
           MGQKV+P G+R+GI + W S W+AD++ YA  L+ D ++RKYL +KL  A VS++VIERP
Sbjct: 1   MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKYLADKLQAASVSKIVIERP 60

Query: 60  AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGSEVHLNIVEIRKPELDAQLVAESI 119
           AK  R+TIHTARPGVVIGKKG D+EVLR  +SK+ G+   +NI EIRKPELDA+LVA+SI
Sbjct: 61  AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120

Query: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
           AQQLERRV FRRAMKRAVQ+AMR+GAQGI++  SGRLGGAEIAR EWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180

Query: 180 DVDYGVGTAHTTYGSCGVKVWVFKGEIL 207
           D+DY    +HT YG  G+KVW+FKGE+L
Sbjct: 181 DIDYSTSESHTQYGVIGIKVWIFKGEVL 208