Pairwise Alignments

Query, 1022 a.a., error-prone DNA polymerase from Magnetospirillum magneticum AMB-1

Subject, 1026 a.a., DNA-directed DNA polymerase III (polc) from Pseudomonas stutzeri RCH2

 Score =  946 bits (2446), Expect = 0.0
 Identities = 523/1033 (50%), Positives = 664/1033 (64%), Gaps = 21/1033 (2%)

Query: 2    TPYAELQTLSNYTFLEGASHADELAITASALGLEAIAICDRNTLSGIVRAHVAAKAAGIR 61
            T YAEL  LSN++F  GAS A EL   A   G +A+AI D  +L+GIVRA  A+K  G+ 
Sbjct: 3    TEYAELHCLSNFSFQRGASSARELFERAKRQGYDALAITDECSLAGIVRAWQASKDTGLP 62

Query: 62   LVVGARLDLTDGASLLCFPTDRAAYGRLSRLLTLGRRRAPKGECHLARADVAEHAEGQIL 121
            L++G+ L +  G  L+    +   Y  L +L+T  RRRA KG     R D+ +     +L
Sbjct: 63   LIIGSELQIEGGPKLVLLVENLTGYQALCQLITRARRRAEKGRYQALREDLRDWPLEGLL 122

Query: 122  VLIAPDPLEEGFAAQLAEWRTVVGDRLYLAATRRFRGDDGERLRV----LAGFGIPLVAT 177
             +  PD   +G  A+         +RL+L        DD  +LR      +  GI  VA 
Sbjct: 123  AIWLPD--HDGADAEGRWLLDRFRERLWLGIELHRGPDDALQLRQSLTQASRLGISAVAC 180

Query: 178  NDVLYHTPARRPLADVLTCIRQGTTLAAAGWALSAHGERHLKSPAEMARLFAACPEALAN 237
             DV  H   RR L D +T IR    +A AG  L  +GERHL+S  E+A+L+ A  E LA 
Sbjct: 181  GDVHMHARGRRALQDCMTAIRHHLPVAEAGRHLFPNGERHLRSREELAQLYPA--ELLAE 238

Query: 238  GLEVVRRCRFSLDELAYEYPNE-VAAGMDPQERLEILTRQGAARRYPRGVPPKVQAQLAH 296
             L + +RC F LD+L Y YP+E V  G D    L  L   GA  R+P G+P K +AQL H
Sbjct: 239  TLRISQRCHFQLDQLKYHYPHELVPPGHDTTSWLRKLVEDGARWRWPDGIPEKARAQLEH 298

Query: 297  ELALIRQLGFAPYFLTVHAIVAFAESRGILCQGRGSAANSAVCYCLRVTPVDPAQMDLLF 356
            EL LI  L +  YFLTVH IV FA  +GILCQGRGSAANS+VC+ L +T +DP +  LLF
Sbjct: 299  ELELIADLHYESYFLTVHDIVRFAREQGILCQGRGSAANSSVCFVLGITELDPVRSKLLF 358

Query: 357  ERFISAERGEPPDIDVDFEHERREEVIQHIYDTYGRHRAGLTATVIHYRTRSAIRDVGKV 416
            ERF+S ER EPPDIDVDFEH+RREEVIQ+++  YGR+RA LTA    YR   A+RDV K 
Sbjct: 359  ERFLSRERNEPPDIDVDFEHDRREEVIQYVFQRYGRNRAALTAVASSYRATGALRDVAKA 418

Query: 417  MGLSEDTVEALAKANSGWGRRGIKDEHVRELGLDPTEPGLARTLSLAEELTGFPRHLSQH 476
            +GL  D + ALA     W      D  +RE G DP  P L R L L + L GFPRHLSQH
Sbjct: 419  LGLPPDQINALAGCCGRWSEHIPDDSQLREAGFDPDNPVLRRVLVLTDALIGFPRHLSQH 478

Query: 477  VGGFVISKGRLDELVPIENAGMEDRTVIQWDKDDLDALGLMKVDVLALGMLSCIRKAFDL 536
             GGFVIS+  LD LVPIENA M DRTVIQWDKDDLDA+GL+KVDVLALGMLS IR+ FDL
Sbjct: 479  PGGFVISEQPLDTLVPIENASMADRTVIQWDKDDLDAVGLLKVDVLALGMLSAIRRCFDL 538

Query: 537  LRLHHGRDLCLATLPREDASTYDMLCKADAVGVFQVESRAQMSMLPRLRPRRFYDLVVEV 596
            +  + G    +ATLP ED  TY+M+ +AD +GVFQ+ESRAQM+MLPRLRP+ FYDLV++V
Sbjct: 539  IEHYRGTRWTIATLPAEDKPTYEMISRADTIGVFQIESRAQMAMLPRLRPKTFYDLVIQV 598

Query: 597  AIVRPGPIQGGMVHPYLRRRQGKETVDYPSEELRQVLGKTLGVPLFQEQAMKIAMVAAGF 656
            AIVRPGPIQG MVHPYLRRR  +E VDYPSEEL+ V  +TLGVPLFQEQ M++A+VAA +
Sbjct: 599  AIVRPGPIQGDMVHPYLRRRNKEEDVDYPSEELKPVFERTLGVPLFQEQVMELAIVAAEY 658

Query: 657  TASEADGLRRAMATFRHTGQVGAYGDKLIGGMVARGYERDFAERVFKQIEGFGEYGFPES 716
            T  EAD LRRAMA ++  G +  +  +L   M+A+GY+ DF  R+F+QI+GFG YGFPES
Sbjct: 659  TPDEADKLRRAMAAWKRHGSLEPHRVRLTERMLAKGYQPDFIARIFEQIKGFGSYGFPES 718

Query: 717  HAAAFAHLVYVSAWLKCHYPAAFACALLNSQPMGFYAPAQIVRDAADHGVEIRPVDVNHS 776
            HAA+FA L Y S WLK H PAAFACAL+NS PMGFY P QI++DA  HG+EIRPVDV HS
Sbjct: 719  HAASFALLTYASCWLKRHEPAAFACALINSWPMGFYNPDQILQDARRHGLEIRPVDVRHS 778

Query: 777  DWDCTL-----EGKALRLGLRQVSGLARRDGERLAAAR-GAGYASAYGLWRTSGLERAAL 830
             WDC+L     E  A+RLGLR V      D  R+ AAR    + + + L   + LE  A 
Sbjct: 779  GWDCSLEPCSQEQPAIRLGLRMVRSFREADARRIEAARQRQPFTNIHDLCLRAELEPRAR 838

Query: 831  DRLAAADAFGSMGLGRREAAWAIKALDAPPLPLFEEAPPPPEAKVALPPASVGEEVVGDY 890
            ++LA A     +   R  A WA+  ++ P LPLF   P   E  + LP  SV E+++ DY
Sbjct: 839  EQLADAGVLRGLAGHRHRARWAVAGVE-PQLPLFASLPATEETPINLPLPSVSEDLLNDY 897

Query: 891  AALKLSLKCHPLAVLRDPFRVLGIMTNASLKDRKGGR-VAVSGLVLVRQRPGSANGVLFI 949
            A L  +L  HPLA+LRD  +     ++  L   + GR V+++GLV+ RQRP +A+GV+F+
Sbjct: 898  ATLGTTLGPHPLALLRDELKARRCRSSRELAMIEHGRPVSIAGLVIGRQRPQTASGVIFV 957

Query: 950  TLEDETGIANIVVWPDMFETFRRPILGGHLLRVDGRVQSEDGVIHVVAEKIEDLSAHLGA 1009
            TLEDE G+ N+VVW D+ E  RRP++   LLRVDG ++S  GV H++A ++ DL+     
Sbjct: 958  TLEDEFGMVNVVVWRDLAERQRRPLIQSQLLRVDGHLESASGVRHLIAGRLSDLT----P 1013

Query: 1010 LARGSHYPSRDFR 1022
            L  G    SRDF+
Sbjct: 1014 LLTGLDVRSRDFQ 1026