Pairwise Alignments

Query, 703 a.a., multifunctional fatty acid oxidation complex subunit alpha from Magnetospirillum magneticum AMB-1

Subject, 708 a.a., 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) from Shewanella loihica PV-4

 Score =  608 bits (1568), Expect = e-178
 Identities = 337/710 (47%), Positives = 458/710 (64%), Gaps = 13/710 (1%)

Query: 1   MSDVVTLSVSDRIATVTIDSPPVNAADHPVRAGLQKVFTDLAARSDYDAVLVLCAGRTFM 60
           M++     +  R A + ++ PPVN+    +R  L        A    DA+++  +G+ F 
Sbjct: 1   MTNATLYQIHGRTAVIILNQPPVNSLGLALRTHLLADLKRAEADESVDAIVLASSGKLFC 60

Query: 61  AGADIGEF--DTGIKAPHHQDLFNLVENCAKPVVAALHGTALGAGTELAMACHYRIADKG 118
            GADI EF  D  +  P+   + + +E   K VVAA++G ALG G EL +AC YRIA   
Sbjct: 61  GGADISEFSSDDALAEPNLPQVCDALEASPKLVVAAVNGLALGGGCELTLACDYRIALPA 120

Query: 119 ARIGLPELSLGIIPGAGGTQRAPRLIGLDAAMDLVLSGKPLPAPKAAELGLVDEIAS--G 176
           A++GLPE++LGI+PGAGGTQR PR+ G+  A++++ SG+PL A    + G++D +    G
Sbjct: 121 AKLGLPEVNLGILPGAGGTQRLPRIGGVQLALEMITSGRPLGAAAMLDAGVIDNLYQDGG 180

Query: 177 DLNAAALAFAKKLVAEGKGVRRTCDMAPKDAAKDAEIIAARQAQVAKTMKNRTSPLKALE 236
           +   AA+ FA++LVA+ K  R   +M+   +   +EI    +A +A+  +   +P + ++
Sbjct: 181 NFIQAAVDFAQELVAQHKPKRSCFEMSVDTSNISSEIFNEFRAAIARRSRGYYAPERCIQ 240

Query: 237 AMAATTTLSFAEGLRLEADISKQLEHAVEARAMRHLFFADREVRKIPGIT-KDIKARPIR 295
           A+ A   L  AEGL+ E  +  +     +ARA +HLFFA+R V KIPGI  K    R IR
Sbjct: 241 AVEAACELPLAEGLKREHQLFMECLDTPQARAQQHLFFAERGVAKIPGINPKTTATREIR 300

Query: 296 KVGIIGAGTMGGGIAMCFANIGIPVTIIDVSDENLQRGLGVIRKNYERSVSRGSLTQEQL 355
           KV +IG+GTMGGGIAM F N+GIP  I+D++ E L+RGLGVIRKNYE ++ +G L+Q QL
Sbjct: 301 KVAVIGSGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKKGKLSQAQL 360

Query: 356 ESRMGLLSASTDYAALKDADLAIEAVFEKMELKKDIFAKLDAVLPAGAILGTNTSTLDID 415
           + RM LLS +TDYA + D DL IEAVFEKME+KK +F  LDA    GAIL TNTSTLD+D
Sbjct: 361 DERMALLSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILATNTSTLDVD 420

Query: 416 EIANTTKRPADVIGLHFFSPANVMPLLEIVQGKQTAMDVLLTALDMAKLIKKTGVVSKVC 475
           EIA  T RP DV+GLHFFSPANVM LLEIV+  +TA D LLT + +A+ IKK  VVS VC
Sbjct: 421 EIAAETSRPQDVLGLHFFSPANVMRLLEIVRANKTAPDALLTTVQLAQRIKKVPVVSGVC 480

Query: 476 YGFIGNRMMDPYGREAERMVLEGATPAEIDGALEGWGMAMGILAVYDMAGVEVGDNTRIA 535
           +GFIGNR  D Y RE+  ++LEGA+PA+ID     +GM MG+ ++ D+AG++VG  TR  
Sbjct: 481 WGFIGNRATDSYLRESMSLILEGASPAQIDKVHTEFGMPMGLPSMVDLAGIDVGILTRED 540

Query: 536 NPHMVPD-DPSFYRCSTLLVANKWLGQKVGRGYYRYDSPDRKRASDPEVIEMMHAEGKRL 594
                 D DPS +     L A +  GQK GRG Y Y+  D++   DPEV+E+     K  
Sbjct: 541 RKAFTTDLDPSHFAILHKLYAKQRYGQKTGRGLYIYEGRDKQ--EDPEVLELAAEAAKEF 598

Query: 595 NVPARKP---GKDEILERCLYSMINEGAKLLEEGIALRASDIDVVYTAGYGFPRYRGGPM 651
            V  R P      EILER +Y +INEGA++LEEGIALRASDID+V   G+GFP +RGGPM
Sbjct: 599 GVTRRSPEQISDQEILERTIYPIINEGARILEEGIALRASDIDIVLAYGFGFPIFRGGPM 658

Query: 652 FYADTIGLKVIYDKIVEFQKTLD--PRYWTPAPLLEKLAKAGSTFAQWDA 699
            YAD IGL+ +   + +++ TLD    ++ PAPLLE+L K G TFAQ+ A
Sbjct: 659 QYADEIGLERVLTALNKYRDTLDKGELWFKPAPLLERLVKEGKTFAQYQA 708