Pairwise Alignments

Query, 335 a.a., integrase from Magnetospirillum magneticum AMB-1

Subject, 366 a.a., Site-specific recombinase XerD from Sphingomonas koreensis DSMZ 15582

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 7/129 (5%)

Query: 187 LATGQRQGDLIRLRWDDI----SDGVVHVAQEKTGKELWLPVSKHLAGVLARAPRQAVTV 242
           LATG RQG+++ L WD +       +V     K G+ L +P++     VL R   +  T 
Sbjct: 183 LATGLRQGNVLDLTWDRVYLNRRMAMVEHGDTKNGEALGVPLNDLAMAVLERQRGKHETH 242

Query: 243 LVNSRGTPWIKANPLAQAFGAEITRLGLDGLVFHGLRKTAAVALADVGCSTKQIAAVTG- 301
           +   RG P   AN   +A+   + R G+    +H LR T A  L      T  +  + G 
Sbjct: 243 VFTFRGEPLRSAN--TRAWRKALVRAGISDFRWHDLRHTWASWLRQSDVPTWVLQELGGW 300

Query: 302 QSDQMVEHY 310
           +S+ MV  Y
Sbjct: 301 KSEAMVRRY 309