Pairwise Alignments

Query, 669 a.a., ferredoxin from Magnetospirillum magneticum AMB-1

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 515 DQAKCTLCMACVSACPAKALSGHPDKPSLGILEVNCVQCGLCRVTCPEKAVSL 567
           ++ KC +C+ C   CP +A+S   D  S  +    CV CG C   CP KA+ L
Sbjct: 110 NRKKCVMCLVCTKNCPFEAISESDDTISFNM--DKCVLCGHCEEICPAKAIKL 160



 Score = 43.1 bits (100), Expect = 9e-09
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 512 IAVDQAKCTLCMACVSACPAKALSGH-PDKPSLGILEVNCVQCGLCRVTCPEKAVSLLP- 569
           I ++   C LC  C+  CP  A+S + P+ P    ++  CV C  C  TCP  A+ +   
Sbjct: 31  IEINPEICILCNRCLEVCPVTAISSNFPEVPD---IDNKCVYCNTCVETCPVDAIKITKT 87

Query: 570 --RLAFGS---EARLRQVLKEEEPYECIRC 594
             R+  G+   E RL+    +    +C+ C
Sbjct: 88  RVRVENGNLIIENRLKSKKLDYNRKKCVMC 117



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 277 HSRNGQVACTRCLDACPSGALSPQGDAAAVDAHVCGGHGPCASVCPTGAIRFD 329
           ++R   V C  C   CP  A+S   D  + +   C   G C  +CP  AI+ +
Sbjct: 109 YNRKKCVMCLVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161



 Score = 31.6 bits (70), Expect = 3e-05
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 283 VACTRCLDACPSGALSPQGDAAAVDAHVCGGHGPCASVCPTGAIR 327
           + C RCL+ CP  A+S          + C     C   CP  AI+
Sbjct: 39  ILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIK 83



 Score = 30.8 bits (68), Expect = 5e-05
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 502 PLEA-GDPFGTIAVDQAKCTLCMACVSACPAKAL 534
           P EA  +   TI+ +  KC LC  C   CPAKA+
Sbjct: 125 PFEAISESDDTISFNMDKCVLCGHCEEICPAKAI 158