Pairwise Alignments

Query, 278 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

Subject, 267 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Sphingomonas koreensis DSMZ 15582

 Score =  176 bits (447), Expect = 4e-49
 Identities = 101/238 (42%), Positives = 141/238 (59%), Gaps = 3/238 (1%)

Query: 40  MGGSRKRIYVVDDEPDIRALLRQVLEGYGYHVTPLASGALARQAIRRDPPDLCIVDLGLP 99
           M      + +VDDE  IR  L Q L    + VT +A    AR  +     DL ++D+ +P
Sbjct: 28  MTADTPHLLLVDDERSIREPLAQYLTKQNFRVTQVADAEAARARLSAYAIDLVVLDIMMP 87

Query: 100 DMDGLTLVRELWEDVRFGVIILTGRGGVSDRVLGLELGADDYIVKPFEPRELVARVNSVI 159
             DGL+L R +       VI+LT +   +DR++GLE+GADDY+VKPF PREL AR+  V+
Sbjct: 88  GEDGLSLCRHIRATSDTPVILLTAKSEETDRIVGLEMGADDYVVKPFSPRELAARIKVVL 147

Query: 160 RRRDQLAAT--GAPVTTRAVFADWVFESGDLSLTHADGRQETLTAAEAVLLTALLRAPKR 217
           RR  Q   T   AP +    F+ WV ++G+ +L   DG    L+  E  LL AL+  P+ 
Sbjct: 148 RRM-QAGGTRQHAPESGSFAFSGWVLKTGERALVDRDGVSVPLSTGEYNLLLALVMRPRA 206

Query: 218 VLSREQLQGAEPEKDDIAFDRAIDVRISRIRKKIEADPKSPRLIKTVYGAGYLFSADV 275
           VL+R+QL      ++  AFDRAID ++SR+RKKIE D K+P LIKTV+G GY  ++DV
Sbjct: 207 VLTRDQLLDLTQGREAAAFDRAIDNQVSRLRKKIEPDAKNPSLIKTVWGGGYTLASDV 264