Pairwise Alignments

Query, 744 a.a., DNA topoisomerase IV subunit A from Magnetospirillum magneticum AMB-1

Subject, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

 Score =  497 bits (1280), Expect = e-145
 Identities = 282/745 (37%), Positives = 435/745 (58%), Gaps = 29/745 (3%)

Query: 10  IRDTPLAEALGERYLAYAMSTIVSRSLPDVRDGLKPVHRRLLFAMRQLKLDPSGGFKKCA 69
           +   PL +   + YL Y+M  I+ R+LP + DGLKPV RR+++AM +L L  S  +KK A
Sbjct: 10  VEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSA 69

Query: 70  RVVGDVIGKYHPHGDVAVYDTLVRLAQDFAVRYPLVEGQGNFGNIDGDNA-AAMRYTEAK 128
           R VGDV+GKYHPHGD A Y+ +V +AQ F+ RYPLV+GQGN+G  D   + AAMRYTEAK
Sbjct: 70  RTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAK 129

Query: 129 LTEIAAALMEGLDEDSVDFRPTYDGTEEEPVVMPSAFPNLLANGSAGIAVGMATSIPPHN 188
           L++ A  L+  L + +VD++P +DGT +EP ++P+  P++L NG  GIAVGMAT IPPHN
Sbjct: 130 LSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHN 189

Query: 189 IGEICDALDHLIAKPDCDVDELIAHMPGPDFPTGGVLVETQAAITEAYRTGKGAFRVRAK 248
           + E+ DA  HLI  P+  + +L+ ++ GPDFPT   ++     + + YR+G+G+ ++RA 
Sbjct: 190 VREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAV 249

Query: 249 WAVEKLSHGLYQIVITEIPYQVQKAKLIEKIAELLSEKKLPLLADIRDESAED--IRLVL 306
           W  E        IVIT +P+QV  AKL+E+IA  +  KKLP++ D+RDES  +   R+V+
Sbjct: 250 WCKEG-----SDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVI 304

Query: 307 EPRNRTVEAELVMEQLFRQTDLESRFSLNMNVLAPDAHGHLTPGVMNLKEVLRAFLDHRM 366
            PR+  V+ +L+M  LF  TDLE  F +N+N++  D      P V  L ++L  ++  R 
Sbjct: 305 VPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNR----PQVKGLVQILSEWISFRR 360

Query: 367 VVLERRARFRLEKIAKRLEVLEGFLKVYADLDKVIRIIRFADEPKAELIKTFKLSEVQAE 426
             +  R ++RL+K+  RL +L+G L  Y +LD+VI IIR  D+PKA L+  F L+++QA+
Sbjct: 361 ETVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQAD 420

Query: 427 AILNMRLRSLNKLQELEIKTEHAELSAEKADLEALLADEPRRWAAIAAQNDETRKAFGGA 486
           AIL+ +LR L KL+E++I+ E  EL  E+  LE LL  E R    +  +       FG  
Sbjct: 421 AILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFG-- 478

Query: 487 TALGKRRTELGDAPSAVVVPIEAYVEREAITMVLSEKGWIRALKGHSDAPEALKFKEGDQ 546
                RR+ L +   A  +     +  EAIT+VLSEKGWIR  KGH    ++L +K GD 
Sbjct: 479 ---DDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDN 535

Query: 547 LGHLLKAWTTDKILVFATDGRFYTIGGDKLPSGRGHGEPLRLMIDLAGDVDIAAVMVHKP 606
                   +  + +   +DGR Y++    LPS RG GEP+   +++A    I  V++ + 
Sbjct: 536 YLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEE 595

Query: 607 GRKLLVATNTDRGFVVEENEVLAQTRAGKMVLNCADGEKA---KFCLPFEGDAVAVIGEN 663
            +  LV ++   GFV + +++L++ R+GK ++N  +  +    +     + D +  I   
Sbjct: 596 DQLWLVGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQ 655

Query: 664 RKLLVFMAEEIPVLTRGRG-------VILQKYRDGGMADIKVFTLAQGLTWNLGDRV--R 714
            ++L+F  +++P L++G+G           K R+  ++++ V      +T   G R    
Sbjct: 656 GRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGL 715

Query: 715 TESDLTPWLGKRASVGRLPPTGFPR 739
             SDL  + G+R   G L P G  R
Sbjct: 716 KVSDLDNFRGERGRRGALLPRGLQR 740