Pairwise Alignments

Query, 344 a.a., membrane protein from Magnetospirillum magneticum AMB-1

Subject, 313 a.a., flagellar motor protein MotB from Pantoea sp. MT58

 Score =  144 bits (363), Expect = 3e-39
 Identities = 96/334 (28%), Positives = 170/334 (50%), Gaps = 61/334 (18%)

Query: 1   MAEGGQQIIIKRVKKVAG--GAHGGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVS 58
           M  G + I++ + +K  G  G+HG +WK+AYADF+TAMMAFF+++WLL+    ++L  ++
Sbjct: 1   MKHGNRPIVLIKKRKHKGHEGSHG-SWKIAYADFMTAMMAFFMVMWLLSIANPQELVQIA 59

Query: 59  NYFAPTMASKSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEF 118
           +YF   +              K+   G Q S+ S+  +          PGG D       
Sbjct: 60  DYFKTPL--------------KIAITGGQRSSDSTSPI----------PGGGD------- 88

Query: 119 APENEGDSSLGPGKGAGQGEGQGAGQGKDRSGMSEQEFKEAQAQR-EQQKFDKAKEVLEG 177
                      P K  G+              +++    +AQ ++ ++ + ++ +E L+ 
Sbjct: 89  ----------DPTKKIGE--------------VNKVVDMDAQKRKLDEIRLNRLREKLDQ 124

Query: 178 AMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVR 237
            ++  P +K  +  ++++   EGLRIQI D +   MF +G +    + R +L  ++ ++ 
Sbjct: 125 LIEADPRLKTLRPHLIINMVEEGLRIQIIDSQNRPMFKTGRAEVEPYMRDILRAIAPILN 184

Query: 238 QLPDNRIAISGHTDAIPFRD-PSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRAD 296
            +P NRI+++GHTD   +     GY+NWELSADRA A+RR L+  G+  G+I R++G AD
Sbjct: 185 DIP-NRISLAGHTDDFQYASGDKGYSNWELSADRANASRRELVIGGLDSGKILRVLGMAD 243

Query: 297 QEPLDKADPKGLRNRRISIILLRENDVGPVDSQS 330
              L         NRRIS+++L  +    ++ ++
Sbjct: 244 TMSLKNRGGNDAVNRRISLLVLNHDTEAAIEKEN 277