Pairwise Alignments

Query, 330 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  123 bits (308), Expect = 9e-33
 Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 46/321 (14%)

Query: 8   LCLLLAAFALAPLAAGPYLLSVLVVVMYFAYVGQAWNIMMGFAGQLSLGHTLYVGLGAYT 67
           L  +L  FA+ P+    Y  ++++  + +  +G   NI++G +GQL LG+  +  +GAY 
Sbjct: 93  LLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYA 152

Query: 68  AGALFVHLGVPAALGLFAAVAAAVLVGGAVGA-----LGFR-FGVKGVYFALLTIAFAEF 121
              L    G    LG +  +     +GGA+ A     LGF    +KG Y A++T+ F E 
Sbjct: 153 YALLNADFG----LGFWTVLP----IGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEI 204

Query: 122 TRILFEH----------IPGLGGPG--GLFLPVGDRTGIDLIHLRGHPLMFYYLILAMTV 169
            R++ E+          I  +  PG  G+ L V + T              YYLILA  +
Sbjct: 205 VRLVLENWGSVTRGPSGISKIARPGLFGMELSVSEAT-----------TYIYYLILAAVI 253

Query: 170 GIFLLCRKLVRSRLGYTWLAVREDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFY 229
                  +L  SR+G  W A+RED+ A  A+GI++   KL A  L A      GV FA  
Sbjct: 254 FTIFAVGRLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAK 313

Query: 230 YNNLFPNQAFGMNRSIEIILAPIVGGLGTLFGPILGALILTPLGEGITMATEALGFKAAG 289
              + P  +F    S  I+   ++GG+G+  G +LGAL+L  L E +   +E        
Sbjct: 314 TTFINP-ASFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSE-------- 364

Query: 290 IKQLCYGLSLLAIVKFLPDGV 310
            + L +G +++ ++ F P G+
Sbjct: 365 YRMLIFGAAMVLMMVFRPQGL 385