Pairwise Alignments

Query, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

Subject, 445 a.a., Type I secretion system, membrane fusion protein LapC from Pseudomonas fluorescens FW300-N2E2

 Score =  226 bits (575), Expect = 2e-63
 Identities = 133/417 (31%), Positives = 228/417 (54%), Gaps = 10/417 (2%)

Query: 54  GLIRFTMLLASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARD 113
           G+I F + LA        +WA+F  + E+   +G+ IP+ ++Q VQ+LEGGIV ++  ++
Sbjct: 37  GIIGFFVFLA--------LWANFAVIDEVTKGDGKAIPSSKIQKVQNLEGGIVAELFVKE 88

Query: 114 GDLVEAGAPIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEERQPDF-SNMPKGYDR 172
           G +VEAGAP++RL+  + +S++ +T A   ++L++ ERL A  ++R  +F +++ K    
Sbjct: 89  GQIVEAGAPLIRLDDTRFVSNVGETEADRLSMLLRVERLSAEVDDRPLNFPADVLKAVPG 148

Query: 173 LMSDNMAIFNSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEMTMRQE 232
             +   +++ S+ Q        +  Q+ Q++ +LR   S++   R  L   ++E+ M + 
Sbjct: 149 QAASEESLYISRRQQLHDEIGGLQEQLIQRQQELREFVSKQAQYRSGLALQRQEINMSEP 208

Query: 233 LVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQKSTMD 292
           LVA+G VS V  L  KR     +G+L         A  A+ EV+ ++ + +   +   + 
Sbjct: 209 LVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSDALT 268

Query: 293 DLGTTINELAQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVCEVVPV 352
            L     +L + Q +   LEDRV+R  + +PVRG+V  L V   G VIQ G ++ E+VP+
Sbjct: 269 QLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKLLVNTIGGVIQPGSDLVEIVPL 328

Query: 353 ETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADE-KGNPF 411
           +  + V+AKI  +D+  L  GQ   VK T YD+  YG +   L +I A +  DE K   +
Sbjct: 329 DDTILVEAKIRPQDIAFLHPGQDATVKFTAYDYTIYGGMKAKLEQIGADTITDEDKKTTY 388

Query: 412 FKGVIDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHER 468
           +   +  + +++G       I PGM  + +IITG KT+L Y+LKPI     ++ HER
Sbjct: 389 YIIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKPIIKARAEALHER 445