Pairwise Alignments

Query, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (506), Expect = 2e-55
 Identities = 126/420 (30%), Positives = 218/420 (51%), Gaps = 26/420 (6%)

Query: 71  VVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGDLVEAGAPIVRLNAAQ 130
           + WAS+ ++ ++   +G+++P+ QVQ +Q+LEGG+V+ IL R+G+ V+ G  ++ L+  +
Sbjct: 65  IAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTR 124

Query: 131 AISDLEQTRAREATLLIKAERLRAL---------------AEERQPDFSNMPKGYDRLMS 175
             SD  +   + A L     +L A                A   Q D+S +   +  ++S
Sbjct: 125 FRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKL--AFPPVLS 182

Query: 176 DNMA--IFNSQSQARD------TSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEM 227
           D+    +   + Q R          SV+  Q++QK+ DL   E++  +LR+     ++E+
Sbjct: 183 DSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKEL 242

Query: 228 TMRQELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQ 287
            + + L  +G+V ++  L  +R+L+  + EL     +    + A+ E     ++     +
Sbjct: 243 DITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINAAQKFR 302

Query: 288 KSTMDDLGTTINELAQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVC 347
               D L    ++L+ + ES   LED+V R  +++PV G VK L V   G VIQ G N+ 
Sbjct: 303 TEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNII 362

Query: 348 EVVPVETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADEK 407
           E+VP E  + V+A+I  +D+  L+   P  VK + YDF RYG ++GTL  ISA +  DE+
Sbjct: 363 EIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQDEE 422

Query: 408 GNPFFKGVIDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHE 467
           GN F+   +  K   +G       I PGM+ + +IITG +T+L Y+LKPI +    +  E
Sbjct: 423 GNSFYLVRVRTKETTLG-HDQNLPIIPGMTASVDIITGKRTVLDYLLKPILSAQSNALRE 481