Pairwise Alignments

Query, 335 a.a., tRNA dihydrouridine synthase DusB from Magnetospirillum magneticum AMB-1

Subject, 334 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 from Synechococcus elongatus PCC 7942

 Score =  217 bits (552), Expect = 4e-61
 Identities = 125/314 (39%), Positives = 180/314 (57%), Gaps = 7/314 (2%)

Query: 4   HTRKSISIGSVTLENPVILAPMAGVTDMPNRRLVKRLGAGLVVSEMIASQAMIRQNRQTM 63
           H +  + +GS+ L + V+ +P+AGV+D   R+LV+R     ++   +A   +    R   
Sbjct: 14  HLQTPLQVGSLILHSRVLQSPLAGVSDRSFRQLVRRSAPQSLIFAEMAHAGLQLAGRDRW 73

Query: 64  QMAQHTAEEFPMSVQLAGCEPKVMAEAAKLNQDLGAAIIDINMGCPVKKVALKGEAGSAL 123
           +   H   E P+  QL G +P  +A AA+  +  GA  ID+NMGCPV KV  K   GSAL
Sbjct: 74  EFLPH---EQPIGAQLFGDQPATLAAAAQQAEAAGAVCIDLNMGCPVSKVTRK-RGGSAL 129

Query: 124 MRNENLAARILTAVVKAVDIPVTLKMRTGWDMNSRNAPSLARVAEECGIRMVTVHGRTRN 183
           +R   LA  I+ AV  AV IPVT+K R GW+  +      A+  E  G +++T+HGR+R+
Sbjct: 130 LREPELAIAIVQAVAAAVSIPVTVKTRLGWEQVT--ILDFAQQLEAAGAQLLTLHGRSRS 187

Query: 184 QMYTGQADWAFIGEVKRAVSIPVIGNGDVESIDDAVRMLELSGADGVMIGRGTYGRPWLP 243
           Q Y+GQADW +I  VK  +SIPVI NGD+ S  DA+  L+ +GADGVM GRG+ G P L 
Sbjct: 188 QGYSGQADWNWITRVKSRLSIPVIANGDINSPADAIACLQQTGADGVMCGRGSLGNPGLV 247

Query: 244 GQVAHYLATGERLPDPSRAEQLQIMLEHLDAMLSHYGSEPGVRIARKHMAWYSKGLPGSA 303
           G +   L TGE+ P+    ++LQ+  EHL  +    G+  G+  ARKH+ WY    P   
Sbjct: 248 GAIDRSLKTGEQTPELELRDRLQLAREHLLLLWEDKGA-AGLLQARKHLGWYLADQPDYQ 306

Query: 304 EFRAEVNRTNDPDQ 317
           + R  + R+ D  Q
Sbjct: 307 DLRQHLLRSEDLSQ 320