Pairwise Alignments

Query, 576 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 714 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  476 bits (1226), Expect = e-138
 Identities = 264/554 (47%), Positives = 359/554 (64%), Gaps = 1/554 (0%)

Query: 23  RAKIFLIVVLSLLGMGAIVAVNLANLHNELMAARKIKTQHVVETAHSLIGHYVKLSQSGQ 82
           + KI +I+ ++ +G+  I AV+L  L  E+M  R+ KT+ VVE AHSL+ HY ++ + G 
Sbjct: 8   KGKISVILGVAAVGLALIAAVSLFGLRAEMMKDRQDKTRSVVEVAHSLVAHYEEMERKGA 67

Query: 83  MSTDAAQAAAIEAIKTMRYAGTEYFWINSLAGKMVVHPIRPDMLGKDLMGLKDPAGKLFF 142
           ++ DAAQAAA +A++ +RYAG+EYF++   A +M++HPIRP+M G+D     DP GKL F
Sbjct: 68  LTRDAAQAAAKDALRRLRYAGSEYFFVIDRAQRMIMHPIRPEMDGQDQSRTADPNGKLLF 127

Query: 143 EAMIDVVKKDKAGFVDYLWPKPGLDQPVPKVSYVKGIEEWGWLVGSGIYVDDVDSAFRAE 202
             M  V      GFVDYLWPKPG  +PVPK+SYV+G E WGWL+GSGIYVDDV +AFR  
Sbjct: 128 VEMTRVGVAADGGFVDYLWPKPGQAEPVPKISYVRGFEPWGWLIGSGIYVDDVAAAFREA 187

Query: 203 VMNLGGIVTGVVLLVLLVSWWIGKNVVDGMRNATGGIRKLAEGDTSVEIKGHERGDEIGE 262
            + LGG+   + L+   ++  + + +V  +   TG ++ LA GDT+V + G +RGDEIG 
Sbjct: 188 ALFLGGLGLLIALVATGIALLVSRAIVRPLHAMTGVMQTLAGGDTAVTVSGTQRGDEIGV 247

Query: 263 LVQAAEIFREHSLTMKRMSEERAEQRRQAEAERRSTLAGLATELERGVKSTVVTVSESAG 322
           + +  +IFR + + ++R   ER +   +   +R   L  L    +  V + V TV ++  
Sbjct: 248 MARTLDIFRSNQIDLQR-HWERQQVEHRVTGQRARALERLTERFDATVSAMVGTVGQAVQ 306

Query: 323 RMRSTATGMAGAIDNASQESQAVAAAAQQTSSNVEAVAAAAEELSSSIRGIGSQVAESTQ 382
            + +TA  ++   D   +E+ +VA A+QQ S NV+ VAAAAEELSS+I  IG+QVA S+ 
Sbjct: 307 ALENTARSLSDTADRNMREAASVAGASQQASVNVQTVAAAAEELSSAIAEIGTQVATSSH 366

Query: 383 IAKEAVDAANRTDGVVRGLSEAADRIGEVVRLINDIAGQTNLLALNATIEAARAGEAGKG 442
           I+ EAV A+ +    + GL  AA +I EV  LI  IA QTNLLALNATIEAARAGE GKG
Sbjct: 367 ISMEAVTASRQASDRIDGLGHAAQKINEVADLITSIASQTNLLALNATIEAARAGEMGKG 426

Query: 443 FAVVANEVKHLASQTAKATEEIGQQIASIQSTTADAVGAIESIGKTIGRMDEIANAIAEA 502
           FAVVA EVK+LA QTAKATEEI  QI+ +Q  +  AV AI  I   I R DEI  +IA A
Sbjct: 427 FAVVAGEVKNLAGQTAKATEEIAAQISEVQQASHGAVTAIREIAGIIARSDEIGTSIAAA 486

Query: 503 VEQQGAATQEIARNVHEAADGAQEVSHHISSISRTASEAGVAARELLGAAAELAGESETL 562
           V+QQGAAT EIAR+  EAA G ++VS  I  +S +A E   AA  LL AA  LA ++ +L
Sbjct: 487 VQQQGAATGEIARSAGEAAQGTRQVSTSIDEVSASALETEKAANSLLDAAESLAQQAGSL 546

Query: 563 RNGVDRFLGEVRAM 576
           R  VD FL  V A+
Sbjct: 547 RALVDAFLVNVEAI 560