Pairwise Alignments

Query, 303 a.a., zinc ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

Subject, 297 a.a., zinc ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 2e-49
 Identities = 106/300 (35%), Positives = 147/300 (49%), Gaps = 11/300 (3%)

Query: 2   RKTLAAALVLFGLSAPAHAEVPAVLVSIKPLHSLVAAVMEGIGEPGLIVSGSASPHGYAM 61
           R  L     LF  SA A      VL SIKP+  +   +M G G P +++   ASPH YA+
Sbjct: 7   RYFLLTVAALFAQSASAIE----VLTSIKPIQMITYELMLGTGTPDVLLPSGASPHDYAL 62

Query: 62  KPSDARAAEKAKLVVWVGPPLESWLERGMARRKDGLSMLSLPGLIRLDTREGGAWDAHEH 121
           +PSD +  ++A LV+W G  LE ++ + +  R   L++  +P L     RE G  + HEH
Sbjct: 63  RPSDVKRIQQADLVIWFGQDLEPFMSKLLEGRTSALTLSQVPNLA---LREYGEEEQHEH 119

Query: 122 GAHRDHHGQDETDPHVWLDPRNAALLAGAVAERLGSLDPANAARYAANAEALKHRLAELD 181
             H  HHG    DPH WL       +A A+  +L  LD     +Y  N       LAE D
Sbjct: 120 DGH--HHGH--YDPHFWLGIGPVGQVASAITAKLIELDADQQQQYQDNLVRFLANLAEQD 175

Query: 182 AELSARLAPVAKRPYVVFHDAHQYFEARYGLSAAGAITVDPERPPGARRMAQLRDRLKAA 241
             +  +L PV   PY VFHDA+ YFE  + L+  G  TV PER PGA+ +  ++  L   
Sbjct: 176 NTIGEKLKPVTTVPYYVFHDAYGYFEQHFALNNLGHFTVSPERKPGAKTLIAIKKTLNDQ 235

Query: 242 GATCVFGEPGAPSATAAMLAEAAGARLGQLDPEGLLVPAGRDSYVQQMRGLASALAECLA 301
            A CVF EP    A    +     A++G LDP G+ +     SY   +  LA +   CL+
Sbjct: 236 LAKCVFSEPQFEPAIIETVVRGTSAKIGVLDPLGISIELQAGSYFAFLNSLAESYYACLS 295