Pairwise Alignments

Query, 889 a.a., valine--tRNA ligase from Magnetospirillum magneticum AMB-1

Subject, 879 a.a., valyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  695 bits (1794), Expect = 0.0
 Identities = 379/898 (42%), Positives = 539/898 (60%), Gaps = 33/898 (3%)

Query: 4   LDKTYRPAEVEPKHYERWEAQGAFAAHTDSNAAPYTIMMPPPNVTGSLHMGHALTFTLQD 63
           L   Y PA+VE K Y+ W     F++  D    PYTI++PPPNVTG LHMGH L  T+QD
Sbjct: 3   LASKYNPADVEGKWYQYWLEHRLFSSKPDGRE-PYTIVIPPPNVTGVLHMGHMLNNTIQD 61

Query: 64  VLIRYRRMTGKDALWQPGTDHAGIATQMVVERQLEAQKVTRHDLGRDNFIKRVWEWKAES 123
           +L+R  RM GK+A W PGTDHA IAT+  V  +L AQ + + DL RD F+K  W+W  E 
Sbjct: 62  ILVRRARMEGKNACWVPGTDHASIATEAKVVNKLAAQGIKKTDLTRDEFLKHAWDWTEEH 121

Query: 124 GGTITRQLRRLGASPDWAKERFTMDEGLSAAVRKVFVTLHRQGLIYRAKRLVNWDPKLHT 183
           GG I +QLR+LGAS DW +  FTMDE  S +V KVFV L+ +GLIYR  R+VNWDPK  T
Sbjct: 122 GGIILKQLRKLGASCDWDRTAFTMDEERSKSVLKVFVDLYNKGLIYRGVRMVNWDPKALT 181

Query: 184 AISDLEVEQREVKGHMWHFRYPVEGMAD-TFITVATTRPETMLGDAAVAVHPEDERFAAL 242
           A+SD EV  +E  G +++ RY VEG  +  +  VATTRPET++GD A+ ++P D + A L
Sbjct: 182 ALSDEEVIYKEEHGKLFYLRYKVEGDPEGRYAVVATTRPETIMGDTAMCINPNDPKNAWL 241

Query: 243 VGKMVRLPIVNRLIPIVADEYSDPTKGTGAVKITPAHDFNDFQVGVRHDLPQINIFDRDA 302
            GK V +P+VNR+IP++ D+Y D   GTG +K+TPAHD ND+ +G +++LP I+IF+ D 
Sbjct: 242 KGKKVIVPLVNRVIPVIEDDYVDIEFGTGCLKVTPAHDVNDYMLGEKYNLPSIDIFN-DN 300

Query: 303 RTIDEVPEGYRGLDRYDARKKVVEEFEALGLLDKIEPHTHMVPYGDRSGVVIEPWLTDQW 362
            T+ E    Y G+DR+D RK++ ++ +A GLL+K E +T+ V Y +R+ VVIEP L+ QW
Sbjct: 301 GTLSEAAGLYIGMDRFDVRKQIEKDLDAAGLLEKTEAYTNKVGYSERTNVVIEPKLSMQW 360

Query: 363 FVDAATLAKPAIEAVETGKTRFVPKHWENTYFEWMRNIQPWCISRQIWWGHQVPAWYGPD 422
           F+     A  A+  V   + +F P  ++NTY  WM NI+ WCISRQ+WWGH++PA++ P+
Sbjct: 361 FLKMQHFADMALPPVMNDELKFYPAKYKNTYRHWMENIKDWCISRQLWWGHRIPAYFLPE 420

Query: 423 GAFFVEETEDEARAAAAAHYGKDV----ELTRDSDVLDTWFSSALWP---FSTLGWPEKT 475
           G + V  T +EA A A    G       +L +D D LDTWFSS LWP   F  +  P   
Sbjct: 421 GGYVVAATPEEALAKAKEKTGNAALTMDDLRQDEDCLDTWFSSWLWPISLFDGINHP-GN 479

Query: 476 PELDRYYPGDVLVTGFDIIFFWVARMMMMGIHFMGDVPFRDIYIHALVRDEKGQKMSKSK 535
            E+  YYP   LVTG DIIFFWVARM+M+G  + G +PF+++Y   +VRD+ G+KMSKS 
Sbjct: 480 EEISYYYPTSDLVTGPDIIFFWVARMIMVGYEYEGKMPFKNVYFTGIVRDKLGRKMSKSL 539

Query: 536 GNIIDPLDLIEKYGCDALRFTLSALAAQGRDVKLAESRVEGYRNFATKLWNAARFCQ-MN 594
           GN  DPL+LI+KYG D +R  +   A  G D+   ++  E  RNF +K+WNA R  +   
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRNFCSKIWNAFRLIKGWT 599

Query: 595 ECRPVAGFDPKAVKETVNRWIVAKTAELAAKVGTAIEGYRYDAAAGGAYQFVWGTFCDWY 654
               +   D  A K  V+ W  +K  E+AA+V      YR   A    Y+  W  F  WY
Sbjct: 600 VDDNIQASD--AAKLAVH-WFESKQNEVAAEVADLFSKYRLSEALMAVYKLFWDEFSSWY 656

Query: 655 LEFAKPIFNGGDEAAKAETRATAAWVLDQILHVLHPLMPFITEELWGQIAER---DGDLM 711
           LE  KP +  G +     T +     LD +LH+LHP MPFITEELW Q+ ER   +G+ +
Sbjct: 657 LEMIKPAYGQGIDRT---TYSATLCFLDNLLHLLHPFMPFITEELWQQMYERNAEEGESL 713

Query: 712 LRSWPALDGLAAPEAEEEMDWVVRVISTVRGVRAEMNVPPSAQVDLLVSGLAETKRGWAK 771
           + S  ++D         + + V  VIS +R +R + N+     +DL V G    +   A+
Sbjct: 714 MVSALSMDTYVDTAFVAQFEVVKGVISNIRSIRLQKNIAQKEPLDLQVLG----ENPVAE 769

Query: 772 THADLITRLVRLTAFDAQATPERVAQASSHGAAQMVVDEATLVMPLGGVIDVDKERSRLD 831
            +A +I ++  L++         V ++ + GA+  +V      +PLG +IDV+ E +R++
Sbjct: 770 FNA-VIQKMCNLSSI-------TVVESKAEGASSFMVGTTEYAVPLGNMIDVEAEIARME 821

Query: 832 KEIARLEGEIAKVDKKLGNADFVAKARPEVVEEQHERRADWAGAVDKLREALERLSGA 889
            E+   EG +  V KKL N  F+  A   V+E + +++AD    +  L+E++  L  A
Sbjct: 822 AELKHKEGFLQGVLKKLSNEKFINNAPAAVLEMERKKQADAESIISSLKESIAALKKA 879