Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Magnetospirillum magneticum AMB-1

Subject, 455 a.a., DNA repair protein RadA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  523 bits (1346), Expect = e-153
 Identities = 278/458 (60%), Positives = 338/458 (73%), Gaps = 12/458 (2%)

Query: 1   MAKSPSSQFVCQECGAVTRKWAGKCEACGAWNSITEEAAREEVP--KGLTAGKGKRIEFV 58
           MAK P+++F+C ECGA   KW+G+C+ CGAWNSI+EE      P  K L   +GK++   
Sbjct: 1   MAK-PATRFICAECGAAHSKWSGRCDGCGAWNSISEEVPLSAGPSKKSLGGIRGKKVPLG 59

Query: 59  GLEGSAAPLARWLTGIGELDRVCGGGLVPGSCLLVGGDPGIGKSTLLLQATARLS-SQIS 117
            L    AP  R  + + ELDRV GGGLV  S +LVGGDPGIGKSTLLLQA A  + +   
Sbjct: 60  DLASEDAPPPRRTSQLEELDRVLGGGLVDASAVLVGGDPGIGKSTLLLQAAASFARAGAK 119

Query: 118 VAYISGEEAVDQVRMRAARLGYAKATVALASAGSLRDIIASLDQPDAPQVVVIDSIQTVY 177
             YISGEEA  QVRMRA RLG A A V L +  +LRDI+ +L+  +AP + ++DSIQT++
Sbjct: 120 AVYISGEEATSQVRMRARRLGLADAAVKLGAETNLRDILTTLEA-EAPDLAILDSIQTLW 178

Query: 178 ADNIESAPGTVSQVRACAAELIRLAKRRGFVLFLVGHVTKEGTIAGPRVLEHMVDTVLYF 237
           +D ++SAPG+V+QVRACA EL+  AKR G  + LVGHVTKEG IAGPRV+EHMVDTVLYF
Sbjct: 179 SDTVDSAPGSVAQVRACAHELVTFAKRSGTSVILVGHVTKEGQIAGPRVVEHMVDTVLYF 238

Query: 238 EGDRGHQFRILRAVKNRFGATDEIGVFEMTEGGLSEVANPSALFLAERRGNVSGSCVFAG 297
           EG+RGHQFRILR+VKNRFG  DEIGVFEMT  GL+EVANPSALFL+ R     GS VFAG
Sbjct: 239 EGERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVANPSALFLSGRDAPAPGSVVFAG 298

Query: 298 MEGTRPMLVEIQALVAPSSLSSPRRAVVGWDTNRLSMVLAVLDARCGLALSGNDVYLNVA 357
           +EGTRP+L E+QALVAPS+L++ RR VVGWD+ RLSM+LAVL+ARCG+  +G DVYLNVA
Sbjct: 299 IEGTRPVLCELQALVAPSALANARRTVVGWDSGRLSMILAVLEARCGIPFTGLDVYLNVA 358

Query: 358 GGLRIAEPAADLAVAAALVSSASDVPVPADMVVFGEIGLSGEVRAVAQADTRLKEAAKLG 417
           GGLRI EPAADLAVA AL+S+  D+ +PA+MVVFGEI LSG +R V Q + RLKEAAKLG
Sbjct: 359 GGLRIGEPAADLAVATALLSAREDIALPAEMVVFGEISLSGALRPVGQTENRLKEAAKLG 418

Query: 418 FAQALVPARPRKDKGGGAAGAGSPLAIRSIGHLQDVLG 455
           F +AL PA       G   G  S L  R +  L  V+G
Sbjct: 419 FTKALAPA-------GSKTGTTSGLETRQMPDLATVVG 449