Pairwise Alignments

Query, 425 a.a., DUF4113 domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 467 a.a., umuC protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  342 bits (876), Expect = 2e-98
 Identities = 189/425 (44%), Positives = 256/425 (60%), Gaps = 5/425 (1%)

Query: 3   VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62
           ++ALVDCNNFY SCER F P L+G+PV+V+SNNDGC +ARSAEAKA+GV MG P FK+R 
Sbjct: 41  LWALVDCNNFYASCERLFRPDLKGRPVVVLSNNDGCVIARSAEAKALGVPMGAPEFKVRD 100

Query: 63  LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGMPVDNLTAWSQ 122
           ++ +H + + SSNYALYGD+S+RVM  LAT  P  E+YSIDE F+ L      +  A  +
Sbjct: 101 MLRAHDVAVFSSNYALYGDLSQRVMRTLATVVPRVEVYSIDEAFIPLPAALAADPVAVGR 160

Query: 123 QVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAALKQTPV 182
            +R  V +W GIPVSVG+G T+TLAKLANRL+K+      V DL+ +   ++  L    V
Sbjct: 161 TLRQRVAQWVGIPVSVGVGPTRTLAKLANRLSKQDSAYGNVFDLTPETVDMDRVLASVDV 220

Query: 183 GDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDTAP 242
           GDVWG+GR+ A +    GI TA  L      W+++ M   G RT  ELRG P  T D  P
Sbjct: 221 GDVWGVGRRSAEMLRGRGILTARALRDADPLWVRQRMTVTGWRTQQELRGMPCLTDDDLP 280

Query: 243 SDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRPDQ 302
             + +   SRSFG  V   E + +AV TF +RA  K R EGLV+  ++V   T R   ++
Sbjct: 281 VPRRSIRSSRSFGQMVRTLEPLREAVATFTARAVAKARAEGLVASCIEVHIRTPR-HTER 339

Query: 303 PQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDL---VRPEDIPR 359
           P++   + I L  PT+ T   I  AL GL+  +R+GY Y KAGV +  L      +    
Sbjct: 340 PRYDETTTITLPCPTADTGLCIRHALTGLERIFREGYLYAKAGVTLFGLEPAAGRQGSLL 399

Query: 360 DLFSPPPESGARPTALMAAVDGINGKMGKGAVGFGLVPD-DAPWKMRCSNRTPSFTTSWD 418
           DL     E  AR   LMAA+D +N + G+G++  G   D  A W M    R+P +TT+W+
Sbjct: 400 DLLDGSHEHKARRERLMAALDAVNLRHGRGSIRHGAEGDPGAAWHMSQKYRSPRYTTAWE 459

Query: 419 DIPVV 423
           ++P V
Sbjct: 460 ELPEV 464