Pairwise Alignments

Query, 425 a.a., DUF4113 domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 417 a.a., DNA-directed DNA polymerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 100/393 (25%), Positives = 160/393 (40%), Gaps = 26/393 (6%)

Query: 5   ALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRHLV 64
           A +DC+ F+ S E+  NPAL  +PVI+     G        A+  GV    P FK   L 
Sbjct: 38  AHMDCDAFFASVEKRDNPALADRPVIIGGGRRGVVSTACYVARIKGVRSAMPMFKALALC 97

Query: 65  DSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGMPVDNLTAWSQQV 124
                +++   +  Y + S  + +++   +P  E  S+DE F+DL G    +    +  +
Sbjct: 98  PD--AVVIKPRFEAYVEASRAIRAMMDEMTPDVEPLSLDEAFMDLGGTARLHGAPPAVML 155

Query: 125 RATVRRW---TGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAALKQTP 181
              V+R     G+  S+G+   K LAK+A+ L K   +   V+  +    +    L   P
Sbjct: 156 ARLVKRMEDELGLTGSIGLSHNKFLAKIASDLDK--PRGFAVIGKAETLDF----LADKP 209

Query: 182 VGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDTA 241
           V  +WG+G    A     GIRT  DL       +    G++GLR     RG     + + 
Sbjct: 210 VRMIWGVGAAGQAALEAAGIRTFTDLARWEQTDLVARFGSMGLRLWHLARGEDARAV-SG 268

Query: 242 PSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRPD 301
            S   +     +F     + + +   V   A + A + + +GL +G V V       + D
Sbjct: 269 RSPVKSISNETTFSEDTADPDLLEGHVWRMAEKVAGRAKAQGL-AGRVVVLKLK---KSD 324

Query: 302 QPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPE---DIP 358
               +    +R    T     +   A+  L  A  DG  Y+  GV + DLV PE   D+ 
Sbjct: 325 HGLITRRHALR--DATQIADRVFREAM-ALFRAVPDGQSYRLLGVGLSDLV-PEDGGDLS 380

Query: 359 RDLFSPPPESGARPTALMAAVDGINGKMGKGAV 391
            DL  P      R      A D I  + G+ A+
Sbjct: 381 GDLLDP---GAVRRARAERATDAIRARFGETAI 410