Pairwise Alignments

Query, 425 a.a., DUF4113 domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 418 a.a., DNA-repair protein (RefSeq) from Shewanella sp. ANA-3

 Score =  247 bits (630), Expect = 6e-70
 Identities = 157/424 (37%), Positives = 220/424 (51%), Gaps = 9/424 (2%)

Query: 3   VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62
           +YALVD N+FY S E+ F P   GKP+IV+SNNDGC VA + +A+ +G+    P F ++ 
Sbjct: 1   MYALVDANSFYCSAEQVFRPDWRGKPIIVLSNNDGCIVAANRQARELGIPKFAPYFHVKE 60

Query: 63  LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLD--GMPVDNLTAW 120
                G+I+ SSNY LY D+S ++M ++  F+P   IYSIDE FL        +  L   
Sbjct: 61  QCAKLGVIVCSSNYELYADLSAKMMEIIGRFAPDQHIYSIDESFLSFKHCHTSIPCLKTH 120

Query: 121 SQQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAALKQT 180
             ++R TV +   IPV VGIG T TLAK+AN  AKK    +GV  +  + + IE  LKQ 
Sbjct: 121 GLRIRQTVWKEARIPVCVGIGATLTLAKIANHAAKKLPGYHGVCLIDNEPQRIE-ILKQL 179

Query: 181 PVGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDT 240
            V DVWGIGR+ +      GI TA+DL   P G  +K       RTV EL GT     D 
Sbjct: 180 LVSDVWGIGRRLSKKLVSMGIHTAYDLAQMPTGLARKQFSIEIERTVRELNGTACKQWDH 239

Query: 241 APSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRP 300
             +DK     +RS G  + +FE +  A+      AA K R +G    ++ +FA    +  
Sbjct: 240 TRADKQQIFSTRSVGERIMDFEALLQALSKHVGIAAAKARAQGSCCKSMLIFANNSPY-- 297

Query: 301 DQPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPEDIPRD 360
           D+      S+I     T+ T  +  AA       +R G +Y K G+ +++L +      D
Sbjct: 298 DEQPVGFKSLIHFPTATNCTIEMTQAASLAAPRLFRPGVKYYKIGIGLINLEQNRYQQLD 357

Query: 361 LFSPPPESGARPTALMAAVDGINGKMGKGAVGFGLVPDDAPWKMRCSNRTPSFTTSWDDI 420
           LF+    S  +PT LM A DGIN + G+  +       +  W MR +  TP +TT W  I
Sbjct: 358 LFN---LSKTKPT-LMNAFDGINARYGRDTLFLAAQGIEQKWAMRRALLTPQYTTLWGGI 413

Query: 421 PVVK 424
           P VK
Sbjct: 414 PRVK 417