Pairwise Alignments

Query, 481 a.a., uptake hydrogenase from Magnetospirillum magneticum AMB-1

Subject, 414 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 10  VGPFNRVEGDLEVTLDVQD-GRVAEARV-NAPLYRGFEQILLGRPPSDALVIAPRICGIC 67
           + P  R EG  ++ L+V D G V +A   N    RGFE +L G+  +   +   RICGIC
Sbjct: 7   ISPTTRHEGHAKLVLNVDDEGIVTKAFYPNTTPVRGFETMLQGKTAAFGPIAVMRICGIC 66

Query: 68  SVSQSVASARALAGLGPAAMPENGTLATNLILACENAADHLTHFML 113
             +  +AS  A+       +P++G +   L+        H  H +L
Sbjct: 67  QATHGIASCEAIENAIDMEIPKDGMILRELLGLGNRMHSHPLHHLL 112



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 11/117 (9%)

Query: 321 PRLDGQVAEVGALARQVVDGHPLARALNAARPGGSVHDRVVARLLELARLIPAMESWIRA 380
           P   G  AE G  AR +  G+         +P G   D  +AR +E    +      I  
Sbjct: 258 PFYRGNPAEGGPRARMIKYGN--------FKPAGGAMDLNLARAMENFEAVKRSLELIDE 309

Query: 381 IRPAEPFCAPPSPLG--EGAAVGLVEAARGTLGHWLGL-HNGRIAQYQIVAPTTWNF 434
           +         P+     E   +G+ EA R T  H   +  +GRI +Y I+A +TWNF
Sbjct: 310 LNINGTVREVPNFYNAKEEFGIGVHEAPRATNTHMAKMGKDGRIEKYNIIAASTWNF 366