Pairwise Alignments

Query, 481 a.a., uptake hydrogenase from Magnetospirillum magneticum AMB-1

Subject, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 106/481 (22%), Positives = 166/481 (34%), Gaps = 103/481 (21%)

Query: 10  VGPFNRVEGDLEVTLDVQDGRVAEAR--VNAPLYRGFEQILLGRPPSDALVIAPRICGIC 67
           + P  R EG  ++ L V D  + E    ++    RGFE+ L+G+    A +   R CGIC
Sbjct: 7   INPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVSRFCGIC 66

Query: 68  SVSQSVASARALAGLGPAAMPENGTLATNLILACENAADHLTHFMLFFAPDLARSCYGGR 127
            ++ + +S  A+        P++G L   L         H  H  L  APD         
Sbjct: 67  PIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEFL-IAPDFIPE----- 120

Query: 128 PWFAAARRRFAAGDGECARALLPARARFLHLMGLLAGKWPHSLALQPGGVTKAVDPGEKI 187
                      A   E  + +   R     ++  + G+  H+  ++ GG+ K +      
Sbjct: 121 -----------ADRVEYIKRIQEMRKTGQFIVDTIGGEAIHAPNIKVGGMLKNITENAAS 169

Query: 188 RLLSILAEFREALETHL--FADSLEAIAALDGLPALDAWADAAPPEAGDFRLFLHIARDL 245
           ++     E+ +  + H+       E+    DG            PE   +  F +IA D 
Sbjct: 170 KIYYKCREYEKLAKEHVEYLIPIFESNMLADGTEI---------PEKLGYHDFGYIATDA 220

Query: 246 DFTGLGAGPGRFISSGSFGLFAPGVWAQGASTPFDPAQVSEDHAHSWMEGAILAPAVGKT 305
            +                          G     D ++V E   +   E  +   A    
Sbjct: 221 TY--------------------------GNRENIDQSKVVEYTPYDVYEKDVAVQAC--- 251

Query: 306 IPAPDKPEGYSWCKAPRLDGQVAEVGALARQVVDGHPL----ARALNAARPGGSVHDRVV 361
                          PR +G++ EVG  AR     H      A A++ AR   +V    V
Sbjct: 252 ------------TTIPRYNGRLMEVGPRAR-FAKFHDFKNKGAMAIHIARAYENVVH--V 296

Query: 362 ARLLELARLIPAMESWIRAIRPAEPFCAPPSPLGEGAAVGLVEAARGTLGHWLGLH-NGR 420
            R +E+   +          R  EP        GE   +G+ EAARG   H   +   GR
Sbjct: 297 KRAMEIIDELDVNGK----TRSNEPILGD----GEKIGLGVHEAARGHNTHQAAIDAKGR 348

Query: 421 IAQYQIVAPTTWNFSPRDAQGNPGALEIALAGAPVLPGETTPVAVQHVVRSFDPCMVCTV 480
           I  Y  +  TTWN  P   +   G               T     +HVVR++DPC+ C  
Sbjct: 349 ITYYNAIVATTWNI-PLIGKATEG---------------THYKFAEHVVRAYDPCVSCAT 392

Query: 481 H 481
           H
Sbjct: 393 H 393