Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

Subject, 235 a.a., response regulator transcription factor from Synechocystis sp000284455 PCC 6803

 Score =  141 bits (356), Expect = 9e-39
 Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 12/236 (5%)

Query: 1   MSRILVVDDEPQIRKFLRISLAANGYEVAEAESGAAGLQAFRAACPDLLILDLGLPDMDG 60
           M  IL+V+D+ +I + +R +L    +       G  GL+ F+   PDL++LDL LP +DG
Sbjct: 1   MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 60

Query: 61  QEIISAVRQ---DCDIPIIVLSVRAQELDKVEALDRGANDYVTKPFGVAELMARVRAVLR 117
            E+ + +RQ     D  I++L+ + +E+D++  L  GA+DY+ KPF   EL+ARVRA+LR
Sbjct: 61  LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLR 120

Query: 118 PHLPKEG---GQVVESGSLKIDLDRLVVRK----AGSEIHLSRKEWDLLAFFARHPDHVL 170
             L ++G   GQ+  +   ++DLD+    +       E+ L+  E++LLA F  +P  V 
Sbjct: 121 RQL-RQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVW 179

Query: 171 THKHILKGVWGPAHVDDTAYLRVYVNQLRQKLEDDPARPRLIVTDPGVGYRLRSDP 226
               +++ +WG     D   +  ++ +LR+K+E DPA P  I T  G+GY+   DP
Sbjct: 180 NRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF-EDP 234