Pairwise Alignments

Query, 393 a.a., glycoside hydrolase family 3 protein from Magnetospirillum magneticum AMB-1

Subject, 1001 a.a., beta-N-acetylglucosaminidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  101 bits (252), Expect = 8e-26
 Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 147 PLLVATDQEGGIVSHLSPPLPPMPSLAELASLPLDQRVEAARLYGERQGLELARLGVTVN 206
           PL++  D E G+   L    P  P    L  +  ++ +     YG     +  +LGV VN
Sbjct: 114 PLMITFDGEWGLAMRLRGT-PVFPRNMVLGCIQDNKLIYE---YGREMARQCVQLGVQVN 169

Query: 207 FAPVADIRREGPRNRLDFHSLIARRAISHDPEIVGQIATAYSTGLLRAGIVPTVKHFPGL 266
           FAPVAD+    P+N      +I  R+   DP  V     AY++GL   G++   KHFPG 
Sbjct: 170 FAPVADVNIN-PKN-----PVINTRSFGEDPVRVADKVVAYASGLEGGGVLSVCKHFPGH 223

Query: 267 GRVREDTHHFQASLAASEDDLEATDWRPFRQVLSDTPALLMVGHVRLAAIDP--DRPASH 324
           G    D+H     L  + + L++ +  PF++ +    + +MVGH+++  I+P    P+S 
Sbjct: 224 GDTDVDSHKTLPVLPFTRERLDSVELHPFKEAIRAGLSGMMVGHLQVPVIEPIGGLPSSL 283

Query: 325 SRAVIHGIIRKKWGFTGRVITDDLTMPPVYHGGLCIAVTEALDAGVDLLL 374
           SR +++ ++ +++ F G + TD L M  V   G      +AL AG D++L
Sbjct: 284 SRNIVYDLLTEEFAFKGLIFTDALAMKGVSGNG--NVSLQALKAGNDMVL 331