Pairwise Alignments

Query, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 302 a.a., high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  187 bits (474), Expect = 3e-52
 Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 18/301 (5%)

Query: 5   FLQYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAAGVPIY-- 62
           F + LF GLT G+IYAL  LG+ ++Y    +INFA GE  MIG   TA +VA  + IY  
Sbjct: 6   FCELLFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAF-TALIVAGVLGIYGF 64

Query: 63  -------LAIPLAMAASMLVGVAMEKFAIEPARNADVVTIIIITIGASIFMRGAAQLIWD 115
                  +A  +A+      G  +EK A +P R+A  ++ +I  IG SIF++    L   
Sbjct: 65  PEAGILIIAAIVAVIYCAAYGFTLEKVAYKPLRDAPRLSPLISAIGMSIFLQNYVILAQT 124

Query: 116 KEFHSLPAFSGET----PIAVMGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGT 171
            +F   P    +     PIA +  T     + +   SA+ +  L  F   T  GKAM  T
Sbjct: 125 SDFVPFPRLVPDLAILEPIAHITGT---SDVLIIVTSAITMVGLTLFIKYTRMGKAMRAT 181

Query: 172 SHNRLAAQLVGVAVKRVLLASFALSALLGAVGGIVVTP-ITFTNYEAGIMLGLKGFSAAV 230
           + NR  A L+G+   RV+  +F + + L A+GG+++   I   N+  G + G+K F+AAV
Sbjct: 182 AQNRKMAMLLGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNFAIGFIAGIKAFTAAV 241

Query: 231 LGGLGNGTGAIIGGLIVGIAEAMASGYLSSAYKDAIAFIIILFVLFFMPSGLFGKRGTDR 290
           LGG+G+  GA+ GGL++G+ E+ A+GY+SS Y+DA+AF +++ +L F PSG+ GK  T +
Sbjct: 242 LGGIGSIPGAMAGGLVLGLCESFATGYVSSDYEDALAFALLVLILIFRPSGILGKPKTQK 301

Query: 291 V 291
           V
Sbjct: 302 V 302