Pairwise Alignments

Query, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 301 a.a., branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  186 bits (473), Expect = 4e-52
 Identities = 106/301 (35%), Positives = 169/301 (56%), Gaps = 17/301 (5%)

Query: 5   FLQYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAA------- 57
           FLQ L +GL  G IYAL  LG+ ++Y    +INFA G+   IG     T+ AA       
Sbjct: 4   FLQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTVFAALGLSGHV 63

Query: 58  --GVPIYLAIPLAMAASMLVGVAMEKFAIEPARNADVVTIIIITIGASIFMRGAAQLIWD 115
              V + L   + M    L+G  +E+ A  P R++  ++ ++  +GASIF + A  LI+ 
Sbjct: 64  SGAVAVLLVTTMVMGLVALIGYLLERVAYRPLRSSSRLSAVVSALGASIFFQNAVMLIYG 123

Query: 116 KEFHSLPAFSGET-PIAVMGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGTSHN 174
            +F   P     T  ++  G  +    + +FG S   + LL +F +RT  G A+   + +
Sbjct: 124 AKFQVYPNDIRPTMAVSFFGMDIPLVRIMMFGASVALMLLLHFFIHRTRTGTAIRAVAID 183

Query: 175 RLAAQLVGVAVKRVLLASFALSALLGAVGGIVVT----PITFTNYEAGIMLGLKGFSAAV 230
           + AA+L+G+ V RV+   F +   LG   G++V      I FT    G + GLK F+AA+
Sbjct: 184 QGAAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFT---MGWVYGLKAFTAAI 240

Query: 231 LGGLGNGTGAIIGGLIVGIAEAMASGYLSSAYKDAIAFIIILFVLFFMPSGLFGKRGTDR 290
           LGG+GN  GA++GGL++G+ EA+ + Y+S A+KDAIAF++++ +L   P+GL G+R  D+
Sbjct: 241 LGGIGNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLLGERVADK 300

Query: 291 V 291
           +
Sbjct: 301 I 301