Pairwise Alignments

Query, 582 a.a., serine protease from Magnetospirillum magneticum AMB-1

Subject, 308 a.a., signal peptide peptidase SppA from Methanococcus maripaludis S2

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 1/221 (0%)

Query: 299 VALISGIGAIHRGESHHGLDGDGDFGSQTVAEAFRDAVDDDAVKVILFRVDSPGGSYIAS 358
           +ALI+  G I    S  GL      G     E   DA ++D +K ++ +++SPGG  +AS
Sbjct: 36  IALINIDGTITLESSDSGLFSSIQPGVNDYVEWLDDAENNDNIKAVIIKINSPGGGAVAS 95

Query: 359 DTVHHEVERARKAGKKVVVSMGNYAASGGYFVAMGADRIIAAPGTITGSIGVFTGKVVLD 418
           + +  +++   +  K VV  + N  AS  Y  A   + I+A    + GSIGV    +   
Sbjct: 96  EKLSRKIKEVSEK-KPVVAYIENMGASAAYQAASSTNYIVAERQAVVGSIGVRMELIHYY 154

Query: 419 EFWKKLGISWDEMHRGDNAGMWSANQPFSSQAKARIDTLLDHIYADFTGKASAARNLDAA 478
              +KLGI+   +  G    + +  +  + +  A ++++++  Y +F    +  RN+   
Sbjct: 155 GLMEKLGINTTSITGGKYKDIGTPTRSMTEEEYAMLESMVNESYYEFVSWVAENRNMTIN 214

Query: 479 RMDKLARGRIWTGADAKQSGLVDGLGGWAEALSQVRQVGGL 519
              ++A G+I++G  A++ GLVD  G   +A+    ++G +
Sbjct: 215 ETLEVADGKIYSGTQAQRVGLVDITGTEDDAVDMAVKLGNI 255



 Score = 40.8 bits (94), Expect = 8e-08
 Identities = 56/274 (20%), Positives = 110/274 (40%), Gaps = 22/274 (8%)

Query: 3   MRRIGRFLVAFLAVTGFVFLGLMGLGGWLAAHMAEGDGKKMADRMVLTLDLDAPFRDTTR 62
           +++I  + +A   +   + +GL+             DG  ++ + +  +++D      T 
Sbjct: 1   LKKIYYYSIAVFLIIAILMVGLLVF--------VSSDG--ISSKNIALINIDGTI---TL 47

Query: 63  ENPLAMLSGERSYGLRQVVEALDRAAADSRVSGVFATLGHSPLGLAGRQDLRDAVARFRA 122
           E+  + L      G+   VE LD A  +  +  V   + +SP G A   +      +  +
Sbjct: 48  ESSDSGLFSSIQPGVNDYVEWLDDAENNDNIKAVIIKI-NSPGGGAVASEKLSRKIKEVS 106

Query: 123 SGKPAVLFAETLGEGGSGTLDYYLATAFSQVWLQPSGDVGLTGLWVESPFIKGTLDLLGI 182
             KP V + E +G   +    Y  A++ + +  +    VG  G+ +E     G ++ LGI
Sbjct: 107 EKKPVVAYIENMGASAA----YQAASSTNYIVAERQAVVGSIGVRMELIHYYGLMEKLGI 162

Query: 183 KAQFSGRHEYKSAIDMFTET-GFTPAHRENLGRLLDSWSEQIVAGIAAARGLPEPQVREL 241
                   +YK   D+ T T   T      L  +++    + V+ +A  R +   +  E+
Sbjct: 163 NTTSITGGKYK---DIGTPTRSMTEEEYAMLESMVNESYYEFVSWVAENRNMTINETLEV 219

Query: 242 MGKGPFLASEALAARLVDKVGYRDEAWGMIAGIG 275
                +  ++A    LVD  G  D+A  M   +G
Sbjct: 220 ADGKIYSGTQAQRVGLVDITGTEDDAVDMAVKLG 253