Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Magnetospirillum magneticum AMB-1

Subject, 186 a.a., ECF subfamily RNA polymerase sigma-24 subunit from Klebsiella michiganensis M5al

 Score = 63.9 bits (154), Expect = 1e-15
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 31/175 (17%)

Query: 11  RLAATLDRDRGKLLGFVRGRMGGGLQDQDPEDILSDVVLGLLERADLLAEVENLTAYLLT 70
           RL + L+  R +L  F+RGR    L+D+  +DIL +V   L+    +   VEN+ A+L  
Sbjct: 10  RLVSALNACRSRLKAFIRGRTP--LRDE-ADDILQEVTYQLIR---VEQPVENIAAWLFR 63

Query: 71  AMVNRVRDLFRRRRDLPM------------PEAMPAE-----PSQPAGVEERL------E 107
           A  N + D  R++R+LP+            PE   AE     P  P   +E L      E
Sbjct: 64  AARNEMTDRARKKRELPLAGGFSEEEEGDFPEDELAETLFGVPQTPE--DEYLKALLWEE 121

Query: 108 LTRALSLLSTAEQAVWLAVEMEGFAFVELAEAWGEPLGTLLSRKSRATRRLRKAL 162
           L +ALS L  A++  +   E++G+++ ELAE  G     LLSRK +A   LR  L
Sbjct: 122 LNQALSELPPAQREAFEKTELQGYSYRELAEESGVSEQALLSRKHKAVLYLRTRL 176